Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0865 ATGGAGGAATCAGATTCAACACCAAAGTCTCTGATGGAGAACCTGCTTGGCCTTTTGAGGGTTCGCGTGAAGCGTGGTGTCAACCTTGCCGTTCGTGATGTTCGAAGCAGCGACCCCTATGTTGTCATCAAGATGTACCGCCAGAAACTAAAGACTCGTGTGATTAAAAAGGATGTGAATCCTGAGTGGAATGAAGACCTTACTCTTTCTGTTATAAATCCGAATCACAAAGTTAAACTGACTGTGTATGATCATGACACTTTTAGCAAAGATGACAAAATGGGAGATGCAGAATTTGACATCTTGCCCTTTATAGAAGCCTTGAAGATGAACTTAACTGGCCTTGCAAATGGTACTGTAGTCACAAGAATACAACCAAGCAAGCATAATTGCCTGGTTGACGAGAGCTGCATAACTTATAGCAATGGCAAGGTTGTCCAAGATATGATCCTTAGATTGCAAAATGTGGAATGTGGTGAAGTGGAAATCCAATTGCAGTGGATTGATCTTCCTGGTTCTAAGGGTATATGA 531 0.42 MEESDSTPKSLMENLLGLLRVRVKRGVNLAVRDVRSSDPYVVIKMYRQKLKTRVIKKDVNPEWNEDLTLSVINPNHKVKLTVYDHDTFSKDDKMGDAEFDILPFIEALKMNLTGLANGTVVTRIQPSKHNCLVDESCITYSNGKVVQDMILRLQNVECGEVEIQLQWIDLPGSKGI* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0865 176 Gene3D C2 domain 13 174 IPR035892 -
Gso7g0865 176 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Gso7g0865 176 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 8 175 - -
Gso7g0865 176 SMART C2_3c 18 113 IPR000008 -
Gso7g0865 176 Pfam C2 domain 17 102 IPR000008 -
Gso7g0865 176 CDD C2_ArfGAP 16 159 - -
Gso7g0865 176 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 8 175 IPR044562 -
Gso7g0865 176 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 102 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0865 Gso-Chr7 9855389 9860267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0865 49 176 C2H2 Transcription Factor Family AT1G70790 59.231 2.16e-52 162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0865 7 9855389 9860267 Gso7g0865 7 9855389 9860267 ECH
Gso7g0865 7 9855389 9860267 Gso9g1451 9 38587325 38589198 GST
Gso8g0456 8 4241023 4242334 Gso7g0865 7 9855389 9860267 PCT
Gso7g0865 7 9855389 9860267 Gso8g0456 8 4241023 4242334 PCT