Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0860 ATGGGTGGTGTAGGAGGAACACTTGTGGATGGCATTCGTAGCTTCTTCCATCGTTGCAATTCTATTAACTCTCACATTCACCATCACAAAAACAAAAAGAAGAACAAGAACAGCAACAACAACAATATTAACAACATTGTCTTTGTGAGACATTTGCGTGCCCAGTTGGCCAACGTTCCCACTCAGCAAACTCCTTCCTTTAACCTTCTCAAAGTCCCCAAACGCTCCCACTTCAAATCTCCTTCCATGGATCGTAACAAAAAGGGTGCACTGGAGGTAGAGTTTTTTACTGAGTATGGAGAGGCAAGTAGGTATGAGATCCACGAAGTGATTGGAAAAGGGAGCTATGGTGTTGTGTGTTCTGCCGTAGACACTCATACTGGGGAAAAAGTTGCAATTAAGAAAATCAACGATGTTTTTGAGCATGTGTCAGATGCCACACGGATCCTAAGAGAAATTAAACTCCTTCGTTTGCTCAGACATCCTGATGTAGTTAAAATTAAGCATATAATGCTTCCTCCCTCACGACGGGAGTTCAGGGATGTCTATGTTGTGTTTGAGTTGATGGAGTCTGACCTTCATCAAGTAATTAGGGCAAATGATGATCTTTCCCCCGAGCACTACCAATTTTTCTTGTACCAACTTCTTCGAGGCCTCAAATTTATACATGCAGCAAATGTGTTTCATCGTGACTTGAAGCCAAAAAATATTCTAGCTAATGCTGATTGCAAGCTAAAATTATGTGATTTTGGACTTGCTCGAGTTTCATTTAATGAGGACCCATCAGCTATATTCTGGACTGACTATGTTGCAACTCGGTGGTATCGTGCACCTGAACTATGTGGTTCTTTTTTCTCAAAATATACCCCCGCAATTGACATTTGGAGCATTGGATGCATATTTGCAGAAATGCTCAGTGGGAAGCCATTGTTTCCTGGAAAAAATGTAGTGCACCAATTGGATCTCATAACCGACCTTCTTGGTACTCCTCCTGCTGAAACCATTTCTAGGATTCGGAATGAGAAGGCTAGAAGGTACCTTGCTAGCATGCCGAAAAAACAACCTATTCCATTCTCCAAAAAATTTCCAAATGCAGATCCATTAGGTCTTAATTTGCTGGAGCGATTACTTGCATTTGATCCTAAAGATCGTCCAGCAGCTGAAGAGGCACTAAGAGATCCTTATTTCCATGGTTTGTCAAATGTGGACCGTGAACCGTCGTCCACTCAACCCATTTCAAAGCTCGAGTTTGAGTTTGAGAGGAGAAAATTGGCCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTAGAGTATCATCCTCGGATGCTTGAAGAATATCTTCGTTGTGGAGAACAAACAAGCTTCATGTATCCAAGTGGGGTTGACCGGTTCAAGCGACAGTTTGCACATCTTGAGGAGCATTATGGCAAAGGTGAACGAAGCACACCGTTGTTGAGGCACCACGCCTCCTTACCTAGAGAGCGAGTTCCTGCTCCCAAGGATGAAAATAATCAAAACAATGATGTTGAAAATCCAACTGGAGCAAATCTTCAGAGTCCTCCAGGGTCTGATGTGACAGATTCTGGAAATACAGATGCACAAAATGGACCCTCCAGGCCAAAGTGCAGCGCACGGAGCCTGTTGAAGAGTGCCAGCATTAGTGGTTCAAAGAGTATAGATGTGAAACAAAGTAAAGTTTCAGAGGAGGAGCCACTTAGAGAGGTCAACAATGAGATTCTGGATGAGTTGACACAGAAGGTTGCTTCCCTCCATTCTTAG 1785 0.4275 MGGVGGTLVDGIRSFFHRCNSINSHIHHHKNKKKNKNSNNNNINNIVFVRHLRAQLANVPTQQTPSFNLLKVPKRSHFKSPSMDRNKKGALEVEFFTEYGEASRYEIHEVIGKGSYGVVCSAVDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDVVKIKHIMLPPSRREFRDVYVVFELMESDLHQVIRANDDLSPEHYQFFLYQLLRGLKFIHAANVFHRDLKPKNILANADCKLKLCDFGLARVSFNEDPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLSGKPLFPGKNVVHQLDLITDLLGTPPAETISRIRNEKARRYLASMPKKQPIPFSKKFPNADPLGLNLLERLLAFDPKDRPAAEEALRDPYFHGLSNVDREPSSTQPISKLEFEFERRKLAKDDVRELIYREILEYHPRMLEEYLRCGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLLRHHASLPRERVPAPKDENNQNNDVENPTGANLQSPPGSDVTDSGNTDAQNGPSRPKCSARSLLKSASISGSKSIDVKQSKVSEEEPLREVNNEILDELTQKVASLHS* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0860 594 SUPERFAMILY Protein kinase-like (PK-like) 100 401 IPR011009 -
Gso7g0860 594 Gene3D Transferase(Phosphotransferase) domain 1 191 420 - -
Gso7g0860 594 MobiDBLite consensus disorder prediction 495 575 - -
Gso7g0860 594 MobiDBLite consensus disorder prediction 504 563 - -
Gso7g0860 594 CDD STKc_TDY_MAPK 104 442 - -
Gso7g0860 594 Pfam Protein kinase domain 105 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0860 594 ProSiteProfiles Protein kinase domain profile. 105 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0860 594 Gene3D Phosphorylase Kinase; domain 1 120 442 - -
Gso7g0860 594 ProSitePatterns Protein kinases ATP-binding region signature. 111 135 IPR017441 GO:0005524
Gso7g0860 594 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 70 536 - -
Gso7g0860 594 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 70 536 - -
Gso7g0860 594 SMART serkin_6 105 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0860 594 ProSitePatterns MAP kinase signature. 140 243 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0860 Gso-Chr7 9786466 9792773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0860 90 594 MAP Kinase Gene Family AT3G18040 79.412 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gso7g0860 Pkinase 1.3e-66 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0860 7 9786466 9792773 Gso9g1455 9 38620504 38626941 GST