Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0859 ATGGAGCCTTCCTCGATCTCTCCACCGCCAGCTCCGCCTGCCACCGCCGTCCCCTTCCCGGCCGAACCCAACGACCACCTTCCACCACCCATTTCCGAACCACCTTCCAACCATCCACCCTACGCCGAGGTTCAGCAGAATGCCGAGCCCGTCTGGGCCGCGCTCGGACTTGCAGATGAGCCCGTGCAGACAGAAGGCAGCAGCAAGAAGCGGGGCCGTCCGAAGAAGAGTGTCACTCCCGGAGCAGGTCCGGCAAAGAGAGGACGTCCTCCCGGTTCTGGGAAAAGGTTGGGCCGTCCTCCCAAGGACAAGTCTGTCACAACAACAACAACGGATGTCTCTGGGCCCAAGAGACGCCCGGGCCGCCCGCCCAAGAATCAGTCTCAGCCAACTCCCATTCCCTTTGCTCCGGCGGATGCAGCCGCTGCCGTGGGTACAGAGTATGTTGCAGCCGCTGAAACTGTGCCGGTTGATGCTGCGGCTGCTCTGGGGCCTAGAGCTCGTGGACGACCGAAGAAATACGCTGATGAGATGGTTGCTGCAGGCCGAGGTAGGGGACGAGGCCGTGGACGTGGTGGCGGCGGCGGAAGAGGACGAGGGAGAGGACGCGGTCAATTGCCTGCGCAGCTCAGAAAATCAGGGGCAAGACCCGTGGGTCGTCCGAAGAAGGGGTCAACTTCTGCTAGTACTACTCAAAATGCTGCTAATGAAGATCTCAGGAGGAAGCTTGAACACTTTCAATCAAAAGTCAAGGAATCTCTTGCAGTTCTTAAGCCTCATTTTAACCATGAAAGTCCAGTCACTGCAATTGCTGCCATTCAAGAGTTAGAAGTACTGGGAACTATGGACCTCAATGCTCCACTAAGGGATGAAACACTTCCACCGCAAGAGGAGCAGCCACCACTGCAGCAGCAGCAGCAGCCACCGCAGCAACAGTTCCCACCACCACAACAGCAGCCACCACAGCAACACCTAGCACCACAACAACTGCCGCCACAGCCACAGGCACCAATATTTCAGCAAACATATCCTCCATTTCATCTGCCGCAGTTCCACCATCACCAGCCGACGCTGCAGTTCCAGCAGCAGCCTCAGCCGCCACAGCTATTCCAGCATCAGGCACAGCCACCTTCCCACCAACAGTTTCATCCTTAG 1155 0.5792 MEPSSISPPPAPPATAVPFPAEPNDHLPPPISEPPSNHPPYAEVQQNAEPVWAALGLADEPVQTEGSSKKRGRPKKSVTPGAGPAKRGRPPGSGKRLGRPPKDKSVTTTTTDVSGPKRRPGRPPKNQSQPTPIPFAPADAAAAVGTEYVAAAETVPVDAAAALGPRARGRPKKYADEMVAAGRGRGRGRGRGGGGGRGRGRGRGQLPAQLRKSGARPVGRPKKGSTSASTTQNAANEDLRRKLEHFQSKVKESLAVLKPHFNHESPVTAIAAIQELEVLGTMDLNAPLRDETLPPQEEQPPLQQQQQPPQQQFPPPQQQPPQQHLAPQQLPPQPQAPIFQQTYPPFHLPQFHHHQPTLQFQQQPQPPQLFQHQAQPPSHQQFHP* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0859 384 Coils Coil 236 256 - -
Gso7g0859 384 SMART AT_hook_2 68 80 IPR017956 GO:0003677
Gso7g0859 384 SMART AT_hook_2 117 129 IPR017956 GO:0003677
Gso7g0859 384 SMART AT_hook_2 94 106 IPR017956 GO:0003677
Gso7g0859 384 SMART AT_hook_2 215 227 IPR017956 GO:0003677
Gso7g0859 384 SMART AT_hook_2 165 177 IPR017956 GO:0003677
Gso7g0859 384 MobiDBLite consensus disorder prediction 354 384 - -
Gso7g0859 384 MobiDBLite consensus disorder prediction 307 339 - -
Gso7g0859 384 MobiDBLite consensus disorder prediction 1 138 - -
Gso7g0859 384 MobiDBLite consensus disorder prediction 283 384 - -
Gso7g0859 384 MobiDBLite consensus disorder prediction 154 244 - -
Gso7g0859 384 MobiDBLite consensus disorder prediction 1 37 - -
Gso7g0859 384 PRINTS AT-hook-like domain signature 68 78 IPR017956 GO:0003677
Gso7g0859 384 PRINTS AT-hook-like domain signature 115 126 IPR017956 GO:0003677
Gso7g0859 384 PRINTS AT-hook-like domain signature 163 173 IPR017956 GO:0003677
Gso7g0859 384 MobiDBLite consensus disorder prediction 169 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0859 Gso-Chr7 9756043 9761730 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0859 - - gmx:100788215 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0859 7 9756043 9761730 Gso9g1456 9 38652128 38658396 GST