Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0854 ATGTGGATGATGGGTTATGAAGGTGGTGAGTTCAACATGGTTGAACATTCACTCATTACTGGAAGGAAACTCAAGCCTCTCATGCCAAGGCCAATGACGACTTCTCTCAACAATGCACCAACAACAACCACTCCTAGCTTATCTCAGATCCATGGGAATGACTTCCTTTCACAATATCATTATCACCATCTTGAACAAAACAAGAGAGAGTTCAATGGTGCAGCACCAGTTGTTGTGAGCTCAAGGTGGAATCCAACCCCAGAGCAACTAAGAGCCCTTGAAGAGTTATATAGAAGAGGAACAAGGACACCATCTGCCGAGCAAATCCAACACATCACTGCACAGCTTAGAAGGTTTGGTAACATTGAAGGGAAGAATGTGTTCTATTGGTTTCAGAATCACAAAGCCAGGGAGAGGCAAAAGCGTCGCCGCCAAATGGAATCAGATGCTGAAACTCCAGAGAAGAAAGATTTAGCTGCAAGTAGGACAGTGTTTGAAGTTGAACGGACCAAGAACTGGACACCCTCAACAAATTGCAGTACTATTGCAGAGGAATCTGTTTCAACACAAAGGACAGCAAAAGCAGTGGCTGCAGAGAGTAGAACAGATGGATGGCTCCTATTAGATGAAGGGGAATTACAACAAAGAAGGAACGTTTTTGAAAGGAATGCAAGGTGGCATGTGATGCAGTTACCTTGTCCTTCTCCTTCTTCTGCACCTGTCACCCACCTCATAAACACCCCTCCCAATGCTTCTGTAGCTAGTAGCATGGCCACTACTACAACCACAGTAACAACAAGAAAAATGGACCCAAACCTCATTAAGACACATGATCTCAGCTTTTTTATTTCACCCCAGAGAGAAAACAGTGCTATCTACTTTAGTGGTAGCAGTAGTACTAGTGAAGAGGATAATTGTGTGGAGTCTCAAACCCTTCAACTTTTCCCATTGAGGAGTGGTGATGGCATCAGTGACAACATGAAGGATAATGAGACAGAGATATCAGCTTCAGCAATGAATGCCAACAACTTGACCCCTGGTCAGTTTTTTGAGTTCCTTCCTATGAAGGAGTAA 1074 0.4376 MWMMGYEGGEFNMVEHSLITGRKLKPLMPRPMTTSLNNAPTTTTPSLSQIHGNDFLSQYHYHHLEQNKREFNGAAPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGNIEGKNVFYWFQNHKARERQKRRRQMESDAETPEKKDLAASRTVFEVERTKNWTPSTNCSTIAEESVSTQRTAKAVAAESRTDGWLLLDEGELQQRRNVFERNARWHVMQLPCPSPSSAPVTHLINTPPNASVASSMATTTTTVTTRKMDPNLIKTHDLSFFISPQRENSAIYFSGSSSTSEEDNCVESQTLQLFPLRSGDGISDNMKDNETEISASAMNANNLTPGQFFEFLPMKE* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0854 357 PANTHER WUSCHEL, PUTATIVE-RELATED 272 356 - -
Gso7g0854 357 PANTHER WUSCHEL, PUTATIVE-RELATED 32 247 - -
Gso7g0854 357 ProSiteProfiles 'Homeobox' domain profile. 86 141 IPR001356 GO:0003677
Gso7g0854 357 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 32 247 IPR044555 GO:0003700|GO:0099402
Gso7g0854 357 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 272 356 IPR044555 GO:0003700|GO:0099402
Gso7g0854 357 Pfam Homeodomain 81 140 IPR001356 GO:0003677
Gso7g0854 357 Gene3D - 79 141 - -
Gso7g0854 357 SUPERFAMILY Homeodomain-like 81 146 IPR009057 -
Gso7g0854 357 CDD homeodomain 82 142 IPR001356 GO:0003677
Gso7g0854 357 SMART HOX_1 78 145 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0854 Gso-Chr7 9670002 9672795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0854 1 356 Wox Gene Family AT3G18010 38.974 1.88e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gso7g0854 Homeodomain 6.5e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0854 - - gmx:100819541 705.286