Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0852 ATGACTCCTCGCGCCGACGATTTCGAAAAGGATAATCTCTCCGCCACCGACGACGACGACGATGATGACGACGGCCTCAAGGAGGACATGGACGCGCTCGCCCGAGCCTGCATGATCGCCGTCCCTCGCCCCGACGATAATTCCACCGCCGAAGATGATATTCCTGCGGAGGACCCGCTCCTCCTCGCCGGCGACTCCATCGTTCCCGCCGCCACCGACGACGACGACGACCAAGACGACCTCGAGTGTCTCAAGAGAGTGCAGAGCCTCTACCAGCCCCTGTCCATTCTTCCGCCGCTGACACCGCCTGCTGCCGGGTCCGACGACGACGACGTGGACGACCTCGAGACGGTGCGCGCCATTATGAAAAGGTTTAGTACCTACGACGAAGGTTCTCATGAAGGTGGAATGGAAATGTTGGTCGAGGGGGATCAGACCTCCAGCCCAGGCTATGAGGGTGACATTGCTAATGACTCAATCTATTACGAATCAGACGTTGGTGAATTATGTCCTGTTTCTCAACATACCAATGAGGCTGCCACCAAGGAGTTGATTCAGAACGTTGAAATGAAGCTTAGTGATTTTGTTGAGAGTTCTGAACCTGATGCTTGTGGGTCATCCAAATTACCACAGAAAAGACTGAGCTGTCCTCCTGTAGTTAGGTTTTTTATTGATGCCATTAATAAAAATAGGGATTTGCAGAGATTTATTAGAAGTAAGTTGATTGAGTTTGAGGCTAAAATTGAGGAAAACAAAAAGATGAGGAATAAGATTAAAATTCTCAAGGACTTCCAGGCTTCATGCACTAGAAGAACAGGGAATGTGTTATCACTGAAAAAAGACCCACGTGTTCAGTTAATATCTTCAAAAAAGTCATTTGCTCCAAAGAACTCTAAGAAACCTAAAAAAGCATCTGCAATGTGTTATGGCCCAGAAGAGAATTCTCATGTCGCCAATTATAGGATGGTATTGGAAAGATTTCCACTTTCATTGGATCGGAAAAAATGGTCTAATGTAGAAAGGGAAAGTCTTTTGAAGGGAATTAAGCAGCAATTCCAAGAAATGGTGCTTCAACTTTCACTTTCTGTTGATAGTTCTGAGGGCTTGCCTGGAGATGCAAATGGCATGGATGATGTAATTGCATCTGTTAAAGATCTTGCAATTACACCTGAGAGGATTAGACAATTTTTACCAAAAGTTAATTGGAATCTGATAGCTTCGATGTATGTTGGTGGCCGTACTGGTGCTGAATGTGAATCGAGGTGGTTGAATTGTGAAGATCCTTTGATCAACCAAGGTGCATGGACGAATGAAGAGGACAAATCTCTTTTACTTATTGTCCAAGATATTGGCATCAGGAACTGGTTTGATATTGCCACATCATTGGGCACAAGCAGGACTCCATTTCAATGCTTAGCACGATTCCAAAGGAGCTTAAATCCTTCCATGCTAAATAGTGAATGGACTGAGGAAGAAGATTCTCAACTCTGTTCTGCTGTGGCATGTTTTGGTGCTAGGGATTGGCAATCTGTGGCTTCTGTTTTAGAACGGCGGACAGGAACCCAGTGCTCAAATAGATGGAAAAAATCCCTTTGTCCTGAGAAGAAAGGGAGCTTTACACGAGAGGAAGATATACGCATAACAGTAGCGGTTATGCTTTTTGGACGAAAATGGAATCAAATAGCTAACTATGTTCCTGGCCGGATCCAATCTCAGTGTAGGGACAGATACCTCAATTGTCTTGATCCTTCTTTGAAATGGGGTGGATGGACTGAGGAAGAGGATTTAAGATTAGAAGCTGCAGTTGTCAAGCATGGATACTGCTGGTCTAAGATTGCTGAAGAAGTGCCACCTCGTACTGATTCTCAATGCCGGAAGAGATGGAAGGTGTTATGTCCTGAATATGTTCCTTTGCTTCAAGAAGCAAGAAAGAAGCAAAGGTCTATTATTGGTTGTAACTTTGTTGATCGAGAATCTGAACGCCCAGCCATTACACTGAATGACTTTCTACCTTTACCCGTGCCAGCTCCAAAATCTGATGTTGGTGCTTCAAATCTCCGCAAGAAGGCCAAGTCAAGCAATGTTCCCAAGAAAATGAGTAAGAAACTTGCAAAAAGAGCTCGACTTCATACCAAGGAAGTACAAGATACAGAGGTATATAGTGATGATGGGATCAAGACTTATGGTGAAGTCTCTGCATGCAGCAATGTTCCCAAGAAGATGAGGTCCAAAAGACATACAAAAAAAACTCGAAATTGTCCCAAGGAAGTAGTGGATATATATTGTAGTGAGAAGGTCAAGACTTGTATTGAGAGTTCAGAAAGTCAATCTACCTGTATTGCGAGTTCTGGAAATCAAGATTCAGACAACATAACTATTGCATGCTTTTTACGCGATAAATCAAAGGAGATGCTATCTAGATTTACCAAAGATTTGAGTCAGGCTTCCTTCTCCTCTAGGAGTATAGATGTTTCTAATAAGCAGGTTGAAAGTCAAGACCCCTTTGATGACCAAATCGGCTTGTCTAAGTCATTTGATACTGTTGGAACTGAAAATTTGTTTGTGCAGCAGAATGTTGCTTCTGATAGACGAGTGGGAAAACCAGAGGATGCAAACACTTTGACAGGTGGTGATCATGATGAAATGACCCTTGCATGCTTTCTGGGAAACAAATCAAAGAAAGGAAGTCAAGCTGCTAACGGACGTGGTGCATGCTCTTCGACCATCATCATACCTGATGATAGTGGACTGTCAATGTCAAAGCATGTTGAAAAGGAGACTGTTTTGCATGGTGGTGTTGCTGAACCAATGGACATCGTTGTGGAAGAAAAGGATGATGAGCTTCTTACTTCCTTCTTGCAAAACAGGCCAACGAGGCAGCGAAAACGACCCAGTAGGTTTTTATAA 2907 0.4376 MTPRADDFEKDNLSATDDDDDDDDGLKEDMDALARACMIAVPRPDDNSTAEDDIPAEDPLLLAGDSIVPAATDDDDDQDDLECLKRVQSLYQPLSILPPLTPPAAGSDDDDVDDLETVRAIMKRFSTYDEGSHEGGMEMLVEGDQTSSPGYEGDIANDSIYYESDVGELCPVSQHTNEAATKELIQNVEMKLSDFVESSEPDACGSSKLPQKRLSCPPVVRFFIDAINKNRDLQRFIRSKLIEFEAKIEENKKMRNKIKILKDFQASCTRRTGNVLSLKKDPRVQLISSKKSFAPKNSKKPKKASAMCYGPEENSHVANYRMVLERFPLSLDRKKWSNVERESLLKGIKQQFQEMVLQLSLSVDSSEGLPGDANGMDDVIASVKDLAITPERIRQFLPKVNWNLIASMYVGGRTGAECESRWLNCEDPLINQGAWTNEEDKSLLLIVQDIGIRNWFDIATSLGTSRTPFQCLARFQRSLNPSMLNSEWTEEEDSQLCSAVACFGARDWQSVASVLERRTGTQCSNRWKKSLCPEKKGSFTREEDIRITVAVMLFGRKWNQIANYVPGRIQSQCRDRYLNCLDPSLKWGGWTEEEDLRLEAAVVKHGYCWSKIAEEVPPRTDSQCRKRWKVLCPEYVPLLQEARKKQRSIIGCNFVDRESERPAITLNDFLPLPVPAPKSDVGASNLRKKAKSSNVPKKMSKKLAKRARLHTKEVQDTEVYSDDGIKTYGEVSACSNVPKKMRSKRHTKKTRNCPKEVVDIYCSEKVKTCIESSESQSTCIASSGNQDSDNITIACFLRDKSKEMLSRFTKDLSQASFSSRSIDVSNKQVESQDPFDDQIGLSKSFDTVGTENLFVQQNVASDRRVGKPEDANTLTGGDHDEMTLACFLGNKSKKGSQAANGRGACSSTIIIPDDSGLSMSKHVEKETVLHGGVAEPMDIVVEEKDDELLTSFLQNRPTRQRKRPSRFL* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0852 968 CDD SANT 434 479 IPR001005 -
Gso7g0852 968 Pfam Myb-like DNA-binding domain 536 581 IPR001005 -
Gso7g0852 968 Pfam Myb-like DNA-binding domain 333 424 IPR001005 -
Gso7g0852 968 Pfam Myb-like DNA-binding domain 589 630 IPR001005 -
Gso7g0852 968 Gene3D - 589 634 - -
Gso7g0852 968 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 17 773 - -
Gso7g0852 968 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 480 535 IPR017930 -
Gso7g0852 968 CDD SANT 389 424 IPR001005 -
Gso7g0852 968 Gene3D - 535 587 - -
Gso7g0852 968 MobiDBLite consensus disorder prediction 12 27 - -
Gso7g0852 968 CDD SANT 538 579 IPR001005 -
Gso7g0852 968 ProSiteProfiles Myb-like domain profile. 535 581 IPR001005 -
Gso7g0852 968 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 536 581 IPR017930 -
Gso7g0852 968 SUPERFAMILY Homeodomain-like 483 577 IPR009057 -
Gso7g0852 968 ProSiteProfiles Myb-like domain profile. 582 632 IPR001005 -
Gso7g0852 968 SMART sant 484 533 IPR001005 -
Gso7g0852 968 SMART sant 586 634 IPR001005 -
Gso7g0852 968 SMART sant 332 428 IPR001005 -
Gso7g0852 968 SMART sant 431 481 IPR001005 -
Gso7g0852 968 SMART sant 535 583 IPR001005 -
Gso7g0852 968 Pfam Myb-like DNA-binding domain 435 496 - -
Gso7g0852 968 Gene3D - 486 534 - -
Gso7g0852 968 Gene3D - 332 428 - -
Gso7g0852 968 SUPERFAMILY Homeodomain-like 408 476 IPR009057 -
Gso7g0852 968 ProSiteProfiles Myb-like domain profile. 480 531 IPR001005 -
Gso7g0852 968 Gene3D - 429 479 - -
Gso7g0852 968 CDD SANT 487 531 IPR001005 -
Gso7g0852 968 MobiDBLite consensus disorder prediction 691 708 - -
Gso7g0852 968 SUPERFAMILY Homeodomain-like 561 633 IPR009057 -
Gso7g0852 968 CDD SANT 590 631 IPR001005 -
Gso7g0852 968 ProSiteProfiles Myb-like domain profile. 427 479 IPR001005 -
Gso7g0852 968 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 582 636 IPR017930 -
Gso7g0852 968 MobiDBLite consensus disorder prediction 679 708 - -
Gso7g0852 968 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0852 Gso-Chr7 9637081 9643655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0852 209 673 MYB-Related Transcription Factor Family AT3G18100 52.941 1.41e-169 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso7g0852 Myb_DNA-binding 3.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0852 K09422 - gmx:100818474 1886.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0852 7 9637081 9643655 Gso9g1460 9 38734490 38740833 GST