Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0844 ATGCCCGGTCACTGCGTATACCACTGGTCGCAGTTCGATGCCGTCAACCACCTTCCGCCGTCGTCATTGGAACGTCTACGAGCCTTTATGGATCCTTTCAGTAAGACATCTAGCTCTTGTTCTCTAACCATGGCTGGATATCACATTGTGTCTAGACTTGCACTAAATATTGGAGTCAGCCAAGTCGTTTACCCCGTTTACCGAAATTTGATTGCCTTGCTTTTGTTGAGCCCATTTGCTTATGTGTTAGAGAAGAATCAAAGACCACCCCTCACTTTATCTTTACTTGTTCAGTTCTTCCTACTTGCATTACTGGGGATCACCGCAAACCAAGGGTTTTACTTGTTGGGATTATACTATGCTTCTCCAACTTTTGCTTCTGCCTTGCAAAACTCGGTTCCTGCAATTACTTTTATCTTGGCCTTGGCTTTAAGGCTTGAAGAAGTCAACATCACAAGGAGAGATGGATTGGCAAAAGTTCTTGGAACCATTGCCAGTGTGGGGGGTGCCACAGTAATAACTCTATACAAAGGTCCTCCTCTTCTTCACCTGCAGATGGACCAGATACAAGGAGACACTTTAGAAGTAGATCAGTCAACAAAAGTTCAAAATTGGACTTGGGGTTGCATATACTTGCTTGGACATTGTTTATCATGGGCTGGCTGGATAGTTTTTCAGGCTCCTGTGGTGAAGAAGTATCCAGCAAAACTAACCCTCACCTCTTTTACATGCTTCTTTGGATTGATCCAATTCTTGATCATAGCAGCCTTTGCAGAAAATGACTTGGAAAATTGGAAGATACAATCACTAGAGGAGCTTTTTATCATTCTATATGCTGGAATTATAGCATCCGGCGTTGTCATATCTCTCCAAACATGGTGTATTCAAAAGGGTGGTCCTGTGTTTGTTGCTGTCTTCCAGCCAGTGCAAACTATTCTAGTTGCTGTCATGGCAGCACTAATTCTTGGTGATCAGCTATACTCTGGAGGGCTTATTGGTGCAATTCTCATTGTGCTTGGTCTATACTTGGTCCTTTGGGGCAAAAACAACGAAAAAAAAGTGACTGAGCCATCACTAACAAACCCCTTGCTTAAGGCAGAGGAAGAGAATAAAGAAACGGTTTCTGTTCCAAAAGACATACCATGA 1146 0.4302 MPGHCVYHWSQFDAVNHLPPSSLERLRAFMDPFSKTSSSCSLTMAGYHIVSRLALNIGVSQVVYPVYRNLIALLLLSPFAYVLEKNQRPPLTLSLLVQFFLLALLGITANQGFYLLGLYYASPTFASALQNSVPAITFILALALRLEEVNITRRDGLAKVLGTIASVGGATVITLYKGPPLLHLQMDQIQGDTLEVDQSTKVQNWTWGCIYLLGHCLSWAGWIVFQAPVVKKYPAKLTLTSFTCFFGLIQFLIIAAFAENDLENWKIQSLEELFIILYAGIIASGVVISLQTWCIQKGGPVFVAVFQPVQTILVAVMAALILGDQLYSGGLIGAILIVLGLYLVLWGKNNEKKVTEPSLTNPLLKAEEENKETVSVPKDIP* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0844 381 Pfam EamA-like transporter family 207 345 IPR000620 GO:0016020|GO:0016021
Gso7g0844 381 Pfam EamA-like transporter family 41 174 IPR000620 GO:0016020|GO:0016021
Gso7g0844 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 268 349 - -
Gso7g0844 381 PANTHER WAT1-RELATED PROTEIN 42 356 - -
Gso7g0844 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 67 174 - -
Gso7g0844 381 PANTHER WAT1-RELATED PROTEIN 42 356 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0844 Gso-Chr7 9536277 9548798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0844 45 375 Nodulin-like Gene Family AT3G18200 68.047 5.90e-164 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0844 - - gsj:114418653 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0844 7 9536277 9548798 Gso7g0844 7 9536277 9548798 ECH
Gso7g0844 7 9536277 9548798 Gso9g1470 9 38843294 38845722 GST