Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0833 ATGCCTGTAGTGACAGAACACATGAAATGGAGAAGACCAAGAAACCAATTCAGGCACCCCATTTCAGAAACTGATGATCCAAACCCTCAAATCCCTTCCATAATCCAATCCTCTCACAGCAAATCCACCTTCTCCTCTCTCTTTTCTTCTTTCTCCACCTCCAATGAAACCAGAGACCAAAATAGAAACAACAACAACAAAAGCAACAGAAAATTCTCTGCAGCAACCTTCAGAGGCTTCGGCTGCACTGCCGGTGCATCGCAGAAGGTGTCGGTGCCGGTGCCTGCGGTGATTCGCTCCTCGGCGGATAGGGAAGGGAAGAGTAGCAGAAAAAAGAAGCACAGAAGGAACAGTAACAGTGGCAACAGCACAAGTGATGATGATGATGATGATGTTTGGTGTGGCCCTGGAATTGGGTTCTCAACTGATGCTGCTGCTGCATCTGTGGAATGTGTTGTGGCTAGGAAGAATGTGTCTGCAAGAGGAAAACTTGATGTGGTGGAGGACAGGGTAACACACAGGGAGCGTTCATCTTATTTTGGAAGGCGCACTGTAAAGCCAGAAAGCTTCTCCTTTCTGGAAGATGAACCTGACATTTTTGCAGCACGCCCTGGATTAGAGCCTTTTGGAACTGCTAGATTCTATCGCCATGTTCCACATCCTTCCCCTGATGGTCTTGCTGAGATAATGATACTTCAAGGAAGAATAATGATGGGGGGACGATTTGATTCACACGACCAATTTAGAGACTGGAGACTTGATGTTGATAACATGTCATACGAGCAATTGCTTGAACTGGGTGAGAGAATCGGTTATGTCAACACTGGGCTCAAAGAAGATGAGATGGGACTCAACATAAGGAAAGTTAAGCCTTCAAGTTCAAATGATGCATCAAAGCATCAACTAGACAAAAAGTGCAGTGTTTGTCAGGAGGAGTATGAATCAGATGATGAGCTGGGGAGATTGAAGTGTGACCACAGCTATCATTTTCAGTGTATAAAACAATGGCTTGTGCATAAAAATTTCTGCCCAGTTTGTAAGCAAGAAGTTGTGGTTCGACACTAA 1065 0.4498 MPVVTEHMKWRRPRNQFRHPISETDDPNPQIPSIIQSSHSKSTFSSLFSSFSTSNETRDQNRNNNNKSNRKFSAATFRGFGCTAGASQKVSVPVPAVIRSSADREGKSSRKKKHRRNSNSGNSTSDDDDDDVWCGPGIGFSTDAAAASVECVVARKNVSARGKLDVVEDRVTHRERSSYFGRRTVKPESFSFLEDEPDIFAARPGLEPFGTARFYRHVPHPSPDGLAEIMILQGRIMMGGRFDSHDQFRDWRLDVDNMSYEQLLELGERIGYVNTGLKEDEMGLNIRKVKPSSSNDASKHQLDKKCSVCQEEYESDDELGRLKCDHSYHFQCIKQWLVHKNFCPVCKQEVVVRH* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0833 354 MobiDBLite consensus disorder prediction 22 70 - -
Gso7g0833 354 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 3 354 - -
Gso7g0833 354 MobiDBLite consensus disorder prediction 7 21 - -
Gso7g0833 354 SUPERFAMILY RING/U-box 305 352 - -
Gso7g0833 354 Pfam Ring finger domain 305 347 IPR001841 -
Gso7g0833 354 MobiDBLite consensus disorder prediction 1 70 - -
Gso7g0833 354 SMART ring_2 306 346 IPR001841 -
Gso7g0833 354 MobiDBLite consensus disorder prediction 95 132 - -
Gso7g0833 354 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 283 353 IPR013083 -
Gso7g0833 354 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 3 354 IPR045191 GO:0061630
Gso7g0833 354 ProSiteProfiles Zinc finger RING-type profile. 306 347 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0833 Gso-Chr7 9269681 9275246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0833 4 261 C3H Transcription Factor Family AT1G73760 38.462 4.31e-42 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0833 - - gmx:100807785 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0833 7 9269681 9275246 Gso7g0833 7 9269681 9275246 ECH
Gso7g0833 7 9269681 9275246 Gso9g1480 9 38988264 38993714 GST