Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0821 ATGAAATTTGGGTGTAAACTGTTTGAGTGCTGCTTCACTAGCTCATCTTCTGACAAATTTCCAGAGCACAGTAAGTTGAAGTGGCGAATCTTCCCCTACAAGGACCTTGCAAAAGTCACAAATAATTTTGATCAATCTCATTGTCTTGGAAAGAGAGGCTTTACCACTGAATATTATGGAAAATTTGAGGATGGATGTGAGATTACAGTCCAGCGCTTTAAGGAAGACAAGCGCTACATTTTGCAACAGTTTATCAATGAAACTGTTATCCTAAATTACTTGCCTCACAAAAATATTGTATCAATTTACGGTTATGCTTCTCATCATGAGGAATCCCTGCTAGTGCATGAATACCTATCCAATGGTAATCTTGCTGCTCATCTTCAAAGTGAAATAGCCAAAAGCAGCAAAATTCCTTGGCTTACACGATTGGATATAGCCATTGATACTGCAAATGCGTTGGACTATCTTCATTATCATGGCATCATCCACCGCAATGTAAAGTCTAGCAACATTCTCCTAGATGCAAACTTTTCTGCTAAAGTTGCTAACCTTCATTTATCACGGAAACTTCCTGATGGAGTTCCTGTCCATGCCACCCATGTTACTACTGATATAATAGGGTCAGGTGGTTATGTAGACCCAGAGTATATGACAAAAGGCTGGCTTAGCGTAAAAAATGATGTTTATAGCTTTGGGGTGGTGTTGTGTGAGCTTCTATCATCGAAGCTGGCAAAATATTGGGTTCTGAATGAAGAGGAAAATCTTGCTACCCTTTTAAACAGAAAAATTGAAAACCAAGCTTTGGTGGAATTGTTGGATCCAAGACTTGGCTTCCAATCAAACCTTAAGATCAAGAGTATGATGACTGCTACAGCTGAGCTTGCAGCTTTGTGCATGCAATGTCCACAAGATCTAAGGCCAAACATGGAACATGTGCTAGAGATTCTCAATGGCATAAAGCAAGGGAGATACGAAACAAACTCGATAAAAGCTTTGAAAATCTTCCACCATGCTGAACTTGAAGAAGCTACTAACAATTTTGGCACTTTCCTTGGAAAGGGAGGGTATGGCTCTGTGTACTATGGAAAACTTCAAGATGGGAGAGAGGTTGCAGTAAAACGTTTTCATGATGAGAACGAGACAGAAAAGACCATTAATCAATTCATGAAAGAAACTGAGATCTTAAGTCTCCTGCACCATCAAAATCTGGTTTCACTTTATGGCCGCACTTCTTGCCATTGCAACAAACACATGCTAGTGTACGAGTACATTTCCAACGGCACTCTTTCTAAACATCTTCATGAATCTTCTTGTGGTAAACTACCATGGCAGACTAGATTCAACATTGCCATAGAAACTGCTGCTGCCTTGGTATTTCTTCATGACTCAGGTATCATCCACCGTGATGTAAAAGGGAGTAATATTCTGTTGGATGAAAATTTTACTGTTAAAGTTGCAGATTTTGGACTCTCACGGTCTCTTCCAGATTATGTTACGCACGTTTCAACTATTCCAGTAGGAACTCGTGCTTACATAGATCCTGACTACTATGACTCAGGAAGGGTCAGTGACAAAAGTGATGTCTATAGCTTTGGGGTGGTCTTGTTTGAACTCATATCATCCAACCCCCCAAGATTAATGGAAGGCACAGATTATGTTAGTCTTGCACAGTTTGCAAAGAGAAAAATCTTAAACAAGGAATTAAACGCAGTGGTGGATCCAAGTTTTCTGTTTGGTTCTGACAAAAACATTATGGAAATGATAACAGCAGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCCAAGGAACTCAGACCATCCATGAAACAGGTGCTAGATACCCTTGAGGGCATAAGGAAAGGAACATGGGGATTCAACCAGGTAACATAA 1896 0.4014 MKFGCKLFECCFTSSSSDKFPEHSKLKWRIFPYKDLAKVTNNFDQSHCLGKRGFTTEYYGKFEDGCEITVQRFKEDKRYILQQFINETVILNYLPHKNIVSIYGYASHHEESLLVHEYLSNGNLAAHLQSEIAKSSKIPWLTRLDIAIDTANALDYLHYHGIIHRNVKSSNILLDANFSAKVANLHLSRKLPDGVPVHATHVTTDIIGSGGYVDPEYMTKGWLSVKNDVYSFGVVLCELLSSKLAKYWVLNEEENLATLLNRKIENQALVELLDPRLGFQSNLKIKSMMTATAELAALCMQCPQDLRPNMEHVLEILNGIKQGRYETNSIKALKIFHHAELEEATNNFGTFLGKGGYGSVYYGKLQDGREVAVKRFHDENETEKTINQFMKETEILSLLHHQNLVSLYGRTSCHCNKHMLVYEYISNGTLSKHLHESSCGKLPWQTRFNIAIETAAALVFLHDSGIIHRDVKGSNILLDENFTVKVADFGLSRSLPDYVTHVSTIPVGTRAYIDPDYYDSGRVSDKSDVYSFGVVLFELISSNPPRLMEGTDYVSLAQFAKRKILNKELNAVVDPSFLFGSDKNIMEMITAVAELAFQCVQCPKELRPSMKQVLDTLEGIRKGTWGFNQVT* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0821 631 ProSiteProfiles Protein kinase domain profile. 43 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0821 631 Gene3D Transferase(Phosphotransferase) domain 1 119 336 - -
Gso7g0821 631 Gene3D Transferase(Phosphotransferase) domain 1 425 626 - -
Gso7g0821 631 PANTHER TYROSINE KINASE FAMILY PROTEIN 24 631 - -
Gso7g0821 631 Pfam Protein tyrosine and serine/threonine kinase 348 616 IPR001245 GO:0004672|GO:0006468
Gso7g0821 631 Pfam Protein tyrosine and serine/threonine kinase 56 260 IPR001245 GO:0004672|GO:0006468
Gso7g0821 631 SUPERFAMILY Protein kinase-like (PK-like) 20 317 IPR011009 -
Gso7g0821 631 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 24 631 IPR044652 -
Gso7g0821 631 SUPERFAMILY Protein kinase-like (PK-like) 329 621 IPR011009 -
Gso7g0821 631 Gene3D Phosphorylase Kinase; domain 1 13 118 - -
Gso7g0821 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Gso7g0821 631 SMART serkin_6 346 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0821 631 SMART serkin_6 43 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0821 631 ProSiteProfiles Protein kinase domain profile. 346 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0821 631 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Gso7g0821 631 Gene3D Phosphorylase Kinase; domain 1 337 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0821 Gso-Chr7 9108857 9112271 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0821 333 621 Receptor kinase-like Gene Family AT1G25390 52.203 6.21e-91 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gso7g0821 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0821 - - gsj:114418636 1248.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0821 7 9108857 9112271 Gso9g1487 9 39083936 39087995 GST