Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0820 ATGGACGAAAATATTACACTACCTTGGCTTAAACGATTGGATATGGCTATTGATATTGCAAATCCTTTGGACCATCTTAACAATTATGGCATCATCCACCGCAATGTGAAGTCCAGCAATTTTCTCCTAGATGTGAACTGTTGTGCTAAAGTTGGTAACCTTCATTTATTGCAGAAACTTCCGGATGGAGTTCCTGTGGATGCCACCCATGTTACTAGTGATAGAGCAGGGTCAAGTGGTTATATGGACCCAGAGTATTTGACAAAGGGCCAGCTTAGCGTAAAAAATGATGTTTATAGCTTTGGGGTGGTGTTGTGTGAGCTTCTATCATCAAAGCTAGCGAAAGACTGGGTTCTGAATGAAGTGGATAATCTTGTTTCCATTTTAAGCAGAAAAATTGAAAACCAAGCTTTGGTGGAGCTGTTAGATCCAAGACTTGGCTTCGAATCAAACCTTAAGATCAAACAGGTTATGACTGTTACAGCTAAACTTGCCCTTAAGCGCATGAAATTAATGTCCACAAGAATTAAGGTCTGTTTCTTGGATGCCCAAGAGATAGCACCTCCTCCTAGGAGGAATACCCAACCACTTGTGGATGAATAA 603 0.408 MDENITLPWLKRLDMAIDIANPLDHLNNYGIIHRNVKSSNFLLDVNCCAKVGNLHLLQKLPDGVPVDATHVTSDRAGSSGYMDPEYLTKGQLSVKNDVYSFGVVLCELLSSKLAKDWVLNEVDNLVSILSRKIENQALVELLDPRLGFESNLKIKQVMTVTAKLALKRMKLMSTRIKVCFLDAQEIAPPPRRNTQPLVDE* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0820 200 Pfam Protein tyrosine and serine/threonine kinase 8 111 IPR001245 GO:0004672|GO:0006468
Gso7g0820 200 SUPERFAMILY Protein kinase-like (PK-like) 4 116 IPR011009 -
Gso7g0820 200 Gene3D Transferase(Phosphotransferase) domain 1 1 178 - -
Gso7g0820 200 ProSiteProfiles Protein kinase domain profile. 1 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0820 200 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 169 - -
Gso7g0820 200 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 3 169 IPR044652 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0820 Gso-Chr7 9099832 9101778 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0820 7 167 Receptor kinase-like Gene Family AT1G25390 43.827 2.24e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gso7g0820 PK_Tyr_Ser-Thr 6.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0820 - - gsj:114419896 400.208