Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0819 ATGGTCCTGCAAATTAGTAATTTCCTCATGAGAATGGGACTTGGTCTCTTTGAGTGCTGCTTCACTAGCTCTTCTTCTGACACGTTTTCAAAGCAGAGTAAGTGGCGAATCTTGCCCTACAAGAAACTTGCAAAAGTCACAAATAATTTTAACCAATCTCATTGTCTTGGAAAGAGAGGATTTGCCACTGAATATTATGGAAAACTTGAGGATGGGCGTGAGATAACGATCCAGTGCTTTAATGAAGACAAGCACCACATGTTGCAACAGTTTATCAATGAAACTGCTATCCTAAACTACTTGCCTCACAAAAATATTGTGTCAATTTACGGGTGTGCTTCTCATCACAAGGAGTCACTACTAGTGCATGAATACCTATCCAATGGCAATCTTGCTTCTCATCTTCAAAGTGAAATAACCAAAAACAGCACACTACCTTGGCTGACTCGATTGGATATAGCCATTGATATTGCAAATTCATTGGACTATCTTCACTATTATGGCATCATCCACCGCAATGTGAAGTCCAGTAATATTCTCCTAGATGTGAACTTTTGTGCTAAGCTTGCTAACCTTCATCTATCCCGGAAACTTCCAGATGGAGTTCCTGTCTATGCTACCCATGTTACTGGTGATATAATTGGGACATGTAGTTATATAGACCCAGAGTATTTGACAAAAGGCCGGCTTAGCGTAAAAAATGATGTTTATAGCTTTGGAGTGGTGTTGTGTGAGCTCTTCTCATCAAAGCTGGCAAAGAATTGGGTTATGAATGAAGAGGATAGTCTTGCTACCATTTTAAGCAGAAAAATTGAAAACCAAACTTTGGTGGAGCTGTTGGATCCAAGACTCGGCTTTGAATCAAACCTTAAGATCAAGCGGATGATGACTGCTACAGCTGAGCTTGCACATCTATGCATGAAATGTCCACAAGAATTAAGGCCAAATATGGAACAGGTGCTAGAGTCACTCGATGGCATAAAGCAAGGAAGATATGAAACAAACTCAACAAAAGCTTTGAAAATCTTCCACCATGCTGAACTTGAAGAAGCTACCAACAAGTTTGACACTTGCCTTGGAAAGGGAGGGTACGGCACCGTGTACTATGGAAAACTTCAAGATGGGCGAGAGGTTGCAATAAAATGTTTCCATGATGAGAGTGAGACAGAAGAGACCATTAAGCAATTCATGAAAGAAACTGCGATCTTAGGTCTCCTGCACCATGAAAATCTGGTTTCACTTTATGGCCGCACTTCTCGCAATTGCAACAAACACATGCTAGTTTACGAGTACATCTCCAATGGCACTCTTACTAAACATCTTCATGAATCTTCTGGTGGTAAACTACCATGGCATAATAGATTGAATATTGCCATTGAAACTGCTACTGCCTTGGTATTTCTTCATGAATCAGGTATCATCCACCGTGATGTAAAAGGGAGTAATATTCTGTTGGATGAAAATTTTACTGTCAAAGTTGCAGATTTTGGATTCTCACGGTCTCTTCCAGATCATGCTACTCATGTTTCAACTATTCCAGTAGGAACTCGTGCTTACATAGATCCTGACTACTATGAATCTGGAAGGGTCAGTGACAAAAGTGATGTCTATAGTTTTGGGGTTGTCTTGTTCGAACTCATATCATCCATCCGCCCAAGTTTAATGGAAGGCACAGATTATGTTACTCTTGCACAGTTTGCAAAGAGAAAAATTTTAAACAAGGAATTAACCGCTGTAGTGGATCAAAGTTTTTGGCTTGGTGTTGACAAAAACATGATGGAAATGATAACAGCAGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCCAAGGAACTCAGACCATCCATGAAACAGGTGCTAGATACCCTTGAGGGCATAAGGAAAGGAACATGGGGATTCAACCAGATAACATAG 1917 0.4043 MVLQISNFLMRMGLGLFECCFTSSSSDTFSKQSKWRILPYKKLAKVTNNFNQSHCLGKRGFATEYYGKLEDGREITIQCFNEDKHHMLQQFINETAILNYLPHKNIVSIYGCASHHKESLLVHEYLSNGNLASHLQSEITKNSTLPWLTRLDIAIDIANSLDYLHYYGIIHRNVKSSNILLDVNFCAKLANLHLSRKLPDGVPVYATHVTGDIIGTCSYIDPEYLTKGRLSVKNDVYSFGVVLCELFSSKLAKNWVMNEEDSLATILSRKIENQTLVELLDPRLGFESNLKIKRMMTATAELAHLCMKCPQELRPNMEQVLESLDGIKQGRYETNSTKALKIFHHAELEEATNKFDTCLGKGGYGTVYYGKLQDGREVAIKCFHDESETEETIKQFMKETAILGLLHHENLVSLYGRTSRNCNKHMLVYEYISNGTLTKHLHESSGGKLPWHNRLNIAIETATALVFLHESGIIHRDVKGSNILLDENFTVKVADFGFSRSLPDHATHVSTIPVGTRAYIDPDYYESGRVSDKSDVYSFGVVLFELISSIRPSLMEGTDYVTLAQFAKRKILNKELTAVVDQSFWLGVDKNMMEMITAVAELAFQCVQCPKELRPSMKQVLDTLEGIRKGTWGFNQIT* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0819 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Gso7g0819 638 SUPERFAMILY Protein kinase-like (PK-like) 336 628 IPR011009 -
Gso7g0819 638 ProSiteProfiles Protein kinase domain profile. 353 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0819 638 PANTHER TYROSINE KINASE FAMILY PROTEIN 32 638 - -
Gso7g0819 638 Pfam Protein tyrosine and serine/threonine kinase 56 324 IPR001245 GO:0004672|GO:0006468
Gso7g0819 638 Pfam Protein tyrosine and serine/threonine kinase 355 624 IPR001245 GO:0004672|GO:0006468
Gso7g0819 638 SUPERFAMILY Protein kinase-like (PK-like) 26 324 IPR011009 -
Gso7g0819 638 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 32 638 IPR044652 -
Gso7g0819 638 Gene3D Transferase(Phosphotransferase) domain 1 126 329 - -
Gso7g0819 638 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Gso7g0819 638 Gene3D Phosphorylase Kinase; domain 1 330 431 - -
Gso7g0819 638 Gene3D Phosphorylase Kinase; domain 1 22 125 - -
Gso7g0819 638 Gene3D Transferase(Phosphotransferase) domain 1 432 632 - -
Gso7g0819 638 SMART serkin_6 50 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0819 638 SMART serkin_6 353 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0819 638 ProSiteProfiles Protein kinase domain profile. 50 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0819 Gso-Chr7 9085252 9089680 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0819 340 628 Receptor kinase-like Gene Family AT1G25390 51.351 8.45e-87 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gso7g0819 PK_Tyr_Ser-Thr 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0819 - - gmx:100801413 1264.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0819 7 9085252 9089680 Gso9g1488 9 39094022 39094789 GST