Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0818 ATGTCAAAACCCTTTTGCGCCCTCTTTGCACTGTCCATCATCCTTGTGACATGTCATGCTCAAACCCTTAATACATCAACAACATGTGAACCTTCTAAATGTGGTAACCTCAACATTAGCTACCCTTTTTGGAAGAAATCCAACACCAACGTTCAAGAATTTTGCGGTTACCCTGAATTTGGCCTTGAATGTTTGGATGACCAAGCCATCATGATTTTTCCAACTGACAGATACCAAGTCACGGATATAAACTATGATATTCATTCAATCACACTTCTTGACATAGATGTGTTGGGACAACCATGTCCTAGGGCTCGACACAACGTTTCCCTACACAATCTCCCTTTATCTTTCAGCTCATTAGATTTTAACCTAAGTTTCTATTTCAACTGCAGTTCTTACCCTTCATCTATTCAGCACATAGGGTGCATGAAACATGATAAGTATCAGTCTTACGTGTTTAAGACCGGGGATGAAGCTGAAAGTAATGGCTTTGATTGGCTTAGGCACTGTGAGGAGCATGTTGTGGTGACAGTGAAGCAGGATGAGATTGAAATTAGTAGTTTGATCACTGGTTTTGGTGATGCTATGCAGAAAGGATTCGTGCTTGATTGGATGAGAGCTCAGGATTGTGCAGTGTGCGAGGAGTCTAATGGCTATTGCAGATTCGACCAAGCCACTAAGCAATCGAGGTGCTTATGCTCAGATGGCAGAACTGAAGCCAAAAGTTGCAAAAAAGGAAAAATTAATTGGAAGGTGAAACTCATTATAGGTGTTGTTTCTGGAGTGGTGGGGGCACTTGCTGTGGGCATTATCGGCTATCTCTGTTATCGTAAAAAGAAGAATCGTTATACAATGTCATATACACAATCTCGGAGCCTCTCTTCTGATCCATCTTCAAAAGACACTGAGAAGGGAATTCAACGCTTTACTCAAAGCTTTGTACCTGGAGTGCACCTCTTCACATATGATGAACTTGAAGAGGCCACAAATTACTTTGACTCATCTAAAGAACTAGGAGAAGGGGGCTTTGGAACAGTGTATTTTGGCAAACTGCGGGATGGGCGTTCTGTTGCAGTGAAGAGGTTGTATGAGAACAACTTTAAGAGAGTTGCACAGTTCATGAATGAAATTAAAATCCTAGCAAATTTGGATCATCCAAATCTTGTGACATTATTTGGATGCACCTCTCGCCACACCCGTGAACTTCTGCTTGTATACGAGTACATTCCTAATGGAACCATTGCCGATCATCTTCATGGTCAACGATCCAAACCTGGAAAACTCCCTTGGCATATTAGAATGAATATTGCTGTGGAGACCGCAAGTGCATTGAAATTTCTTCATCAAAAAGACATCATCCACCGAGATGTGAAAACCAACAATATTCTTCTTGACAATAACTTTTGTGTAAAAGTGGCCGATTTTGGACTCTCACGTCTTTTCCCAGATCATGTCACTCATGTTTCGACAGCTCCACAAGGGACTCCAGGTTATGTGGATCCCGAGTACCACCAGTGCTATCAGCTTACTAAACAAAGCGATGTCTATAGCTTTGGAGTGGTGCTGGTTGAGCTGATATCGTCCTTGCCTGCTGTAGATATTACAAGGCATAGACAAGAAATCAAATTGTCCGACATGGCCATCAACAAGATTCATAGTGAGGCACTGCATGAGCTAGTGGACCCTAGCCTTGGGTTTGAATCGAATTTCAAGGTCAGGAAAATGATAAATGCTGTGGCAGAGTTAGCATTTCAGTGCTTGCAGAGTTCCAAAGAGATGAGGCCTTCTATGGAAGAAGTGGCAGACACTCTCAAGGATATACAGAGTGATGGCAAACATAAAAGCCAGCCTGAGGTAATGGATATCACAAGCACAGCTGATGATGTTGTGTTGCTGAAGGATGACCCTCCTCCACCATCACCTGATTCTAATGCGGTGAGCAAGTTGACAACACCAAATGCTAGCGGATAA 1974 0.425 MSKPFCALFALSIILVTCHAQTLNTSTTCEPSKCGNLNISYPFWKKSNTNVQEFCGYPEFGLECLDDQAIMIFPTDRYQVTDINYDIHSITLLDIDVLGQPCPRARHNVSLHNLPLSFSSLDFNLSFYFNCSSYPSSIQHIGCMKHDKYQSYVFKTGDEAESNGFDWLRHCEEHVVVTVKQDEIEISSLITGFGDAMQKGFVLDWMRAQDCAVCEESNGYCRFDQATKQSRCLCSDGRTEAKSCKKGKINWKVKLIIGVVSGVVGALAVGIIGYLCYRKKKNRYTMSYTQSRSLSSDPSSKDTEKGIQRFTQSFVPGVHLFTYDELEEATNYFDSSKELGEGGFGTVYFGKLRDGRSVAVKRLYENNFKRVAQFMNEIKILANLDHPNLVTLFGCTSRHTRELLLVYEYIPNGTIADHLHGQRSKPGKLPWHIRMNIAVETASALKFLHQKDIIHRDVKTNNILLDNNFCVKVADFGLSRLFPDHVTHVSTAPQGTPGYVDPEYHQCYQLTKQSDVYSFGVVLVELISSLPAVDITRHRQEIKLSDMAINKIHSEALHELVDPSLGFESNFKVRKMINAVAELAFQCLQSSKEMRPSMEEVADTLKDIQSDGKHKSQPEVMDITSTADDVVLLKDDPPPPSPDSNAVSKLTTPNASG* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0818 657 SMART serkin_6 333 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0818 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Gso7g0818 657 Gene3D Transferase(Phosphotransferase) domain 1 410 622 - -
Gso7g0818 657 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 8 646 IPR044652 -
Gso7g0818 657 Pfam Protein kinase domain 334 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0818 657 Pfam Wall-associated receptor kinase C-terminal 146 237 IPR032872 -
Gso7g0818 657 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Gso7g0818 657 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 8 646 - -
Gso7g0818 657 MobiDBLite consensus disorder prediction 608 657 - -
Gso7g0818 657 Pfam Wall-associated receptor kinase galacturonan-binding 29 94 IPR025287 GO:0030247
Gso7g0818 657 Gene3D Phosphorylase Kinase; domain 1 305 409 - -
Gso7g0818 657 SUPERFAMILY Protein kinase-like (PK-like) 314 619 IPR011009 -
Gso7g0818 657 ProSiteProfiles Protein kinase domain profile. 333 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0818 Gso-Chr7 9056347 9071116 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0818 27 657 Receptor kinase-like Gene Family AT1G25390 42.857 7.26e-145 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gso7g0818 Pkinase 2.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0818 - - gmx:100800873 822.772