Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0816 ATGTTCCGCACTCTCCTTCTCTTCCTCTTCTGCCCAACGGCCACACTTCTTCTTGCAAGTAGCAGTGATGTCAATTTAAACATTTCATCTGTGTTTAAGGATTGCAATAGTAGCTATGACACACGCTTAACGGCAAGTAATAGCGGTGATTCTCCTAACGTGCTACGATCACTGGAGGAAACTAATGCAACAGAATTATCAATACTACCACCACCAACCAATGGACCACAACCACAAGCACAAGTACCGACAACTTTATCGCCTGGTCCTTTTTTGTCATCATCATCGATACCAACACCAGAACCAGTATCAGAACCGCCACCATCACTAGAAGTACCATCATCAATACCAGAATCGGCACCAACACCAGTAGAAGTACCATCATCATTACCACCATCATCAATACCACCAAAACCAGTACCAGTTTCATTACAACCACCAGGACAATCGCCAAGTCATTCTTTGCCACCATCAATACCATCAACGATACCTGTATCAGGTAACCACAAATTTCGAAAAAGGAATGTCATTATAGGTGTTGCAAGTGCAGTAGTGGGAGGATTCATGATATGCATCATAGTATATTGTTTTAGATATAGGTCATTAACCGGACTATTCAAATTTTGTTTGACCACAAAGAGCAAACTAGATATTGAAGCATTCTTAAAAATTCATGTTGTATCATTGCAAAGATACAAATTTTCAGAAGTCAAGAAGATGACCAATTCCTTCAAAGTTAAACTTGGTCAAGGTGGTTTTGGTGCAGTATACCAAGGAAAGCTACACACTGGTTGCCCTGTGGCTGTAAAATTATTGAATGCATCCAAAGGAAATGGTGAAGATTTTATCAATGAGGTTTCTAGCATTAGTAAAACGTCTCACATTAATATTGTCACACTTCTGGGATTTTGTTTGAAAGGCCGCAAGAAAGCTCTCATCTATGAGTTTATGGCCAATGGTTCGTTGGACAAGTTTATCTACAACAGAGGGCCAGAAACCATTGCATCTTTGAGATGGCAGAATTTGTATCAAATCTCAATAGGGATAGCGCGAGGATTGGAGTACTTGCATAGGGGATGCAACACTCGAATTCTACATTTTGACATAAAACCACATAATATTCTTTTGGATGAGAATTTTTGCCCCAAGATATCAGATTTTGGGCTAGCAAAGCTCTGTCCCAGAAAAGACAGCATTATATCTATGTCAGATACTAGAGGGACACTGGGGTATGTAGCTCCAGAAATGTGCAATAGACATTTTGGTGGTGTTTCGCACAAATCTGATGTTTATAGCTATGGGATGCTGCTGCTAGAAATGGTAGGAGGGAGGAAGAATATTAATGCTGAAGCTAGTCATACAAGTGAGATATACTTCCCGCATTTGGTATACGGGAGACTTGAGTTGGACAATGATGTAAGGCCAGATGAGCTAATGACCGCAGAAGAAAATGAGATTGCAAAGAGAATGACCATAGTGGGTTTATGGTGCATTCAAACATTTCCAAATGATAGACCAACTATGAGTAGAGTGGTAGATATGTTGGAAGGCAACATGGATTCCTTGGAAATGCCACCAAAACCTTTGCTTTCTTCTCCTACTAGATCAGAAACAGAATCTTCCTCTTGA 1629 0.4021 MFRTLLLFLFCPTATLLLASSSDVNLNISSVFKDCNSSYDTRLTASNSGDSPNVLRSLEETNATELSILPPPTNGPQPQAQVPTTLSPGPFLSSSSIPTPEPVSEPPPSLEVPSSIPESAPTPVEVPSSLPPSSIPPKPVPVSLQPPGQSPSHSLPPSIPSTIPVSGNHKFRKRNVIIGVASAVVGGFMICIIVYCFRYRSLTGLFKFCLTTKSKLDIEAFLKIHVVSLQRYKFSEVKKMTNSFKVKLGQGGFGAVYQGKLHTGCPVAVKLLNASKGNGEDFINEVSSISKTSHINIVTLLGFCLKGRKKALIYEFMANGSLDKFIYNRGPETIASLRWQNLYQISIGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKDSIISMSDTRGTLGYVAPEMCNRHFGGVSHKSDVYSYGMLLLEMVGGRKNINAEASHTSEIYFPHLVYGRLELDNDVRPDELMTAEENEIAKRMTIVGLWCIQTFPNDRPTMSRVVDMLEGNMDSLEMPPKPLLSSPTRSETESSS* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0816 542 MobiDBLite consensus disorder prediction 79 99 - -
Gso7g0816 542 Pfam Protein tyrosine and serine/threonine kinase 244 515 IPR001245 GO:0004672|GO:0006468
Gso7g0816 542 SUPERFAMILY Protein kinase-like (PK-like) 226 516 IPR011009 -
Gso7g0816 542 Gene3D Phosphorylase Kinase; domain 1 198 316 - -
Gso7g0816 542 MobiDBLite consensus disorder prediction 100 114 - -
Gso7g0816 542 Gene3D Transferase(Phosphotransferase) domain 1 317 525 - -
Gso7g0816 542 PANTHER RUST RESISTANCE KINASE LR10-RELATED 168 541 IPR045874 GO:0004672
Gso7g0816 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 364 376 IPR008271 GO:0004672|GO:0006468
Gso7g0816 542 ProSitePatterns Protein kinases ATP-binding region signature. 248 270 IPR017441 GO:0005524
Gso7g0816 542 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 168 541 - -
Gso7g0816 542 MobiDBLite consensus disorder prediction 522 542 - -
Gso7g0816 542 ProSiteProfiles Protein kinase domain profile. 242 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0816 542 SMART serkin_6 242 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0816 542 MobiDBLite consensus disorder prediction 124 158 - -
Gso7g0816 542 MobiDBLite consensus disorder prediction 66 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0816 Gso-Chr7 9040694 9048517 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0816 156 541 Receptor kinase-like Gene Family AT4G18250 50.864 1.55e-127 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gso7g0816 PK_Tyr_Ser-Thr 5.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0816 - - gmx:100799800 770.77