Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0813 ATGTTCCGCACTCTCCTTCTCTTCCTCTTCTGCCCAACGGCCACACTTCTTCTTGCAAGTAGCAGTGATGTCAATTTAAACATTTCATCTGTGTTTAAGGATTGCAATAGTAGCTGTGACACACGCTTAACAGCAAGTAATAGCGATGATTCTCCCAACGTGCTACGATCACTTGAGGAAAATGTAACAGCAACAGCAAGAGCAAGAGCAACAGCAACAACAACAGGACCAGGAACAGCAACGGCAACGGCAACTGCAAATGTAACAGTTGTCTCACCATCATCACAATCAAGACCACGACAATCAACATCGCCGCCATCTATATCAATACAACCAACACCATCAACATTTTTATCACCACCACCATCAACTTCTTTATCGCCAACTCTATCACCGGCACGGGTACCAACATTTTCATCACCAGCAACACAATCAATACTAATACGAGCGTCAGGTAACCACCAATTTTGGAAAAGGAAAGTCGTTATAGGGGTTGCAAGTGCTGTAATGGGAGGATTCATGATATGCATCATAATTTGTTGCTTTAGATACAAGTTATTAACCCAACCAATCAAACTTTGTTCGACCACAAAGAGTGATCAAGACATTGAAGCATTCTTAAAAAATAAAGGAGCTGTAGCACAAAAAAGATACAAATTTTCAGAAGTCAAGAAAATGACCAATTCCTTCAAAGTTAAACTGGGTCAAGGGGGTTTTGGTGCCGTATACAAAGGACAGCTAGTCAGTGGTTGTCCTGTGGCTGTAAAATTATTGAACTCATCCAAAGGAAATGGTGAAGAATTTATCAATGAGGTTGCTACCATCAGTAGAACCTCTCATGTTAACATTGTGACCCTTCTTGGATTTTGTTTGGAAGGCCGCAAAAAAGCTCTCATCTATGAGTTTATGGACAATGGTTCCCTTGAAAAGTTTATTTACAAAAAAGGGTCACAAACCATTGTATCTTTGAGTTGGGAGAATTTGTGTCAAATCTCAATAGGGATTGCTCGAGGGTTGGAGTACTTGCATAGGGGATGCAACACTCGAATTCTACATTTTGACATAAAACCACATAATATTCTTTTGGATGAGAATTTTTGCCCCAAGATATCAGATTTTGGGCTAGCAAAGCTCTGTCCCAGAAAAGAGAGTATTATTTCCATGTCAGATACTAGAGGGACAATGGGGTATTTAGCACCAGAAATGTGGAATAGACGTTTCGGTGGAGTTTCACATAAGTCTGATGTTTATAGCTATGGGATGATGTTGCTAGAAATGGTAGGAGGGAGGAAGAACATTGATGCTGAAGCCAGTCACACAAGTGAGATATACTTCCCGCATTTGGCATACAAGAGGCTTGAGTTGGACAATGATTTAAGAACAGATGAGGTTATGACCACGGAAGAAAATGAGATTGCAAAGAGAATAACCATAGTGGGTTTATGGTGCATTCAAACATTTCCAAATAATCGACCTACAATGAGTAGAGTGATAGAAATGTTGGAAGGCAGCATGAATTCTTTGGAAATGCCACCAAAACCTATGTTTTCTTCTCCTACTAGATCGGCAACTCCTCTTGAAATTAGTTGA 1590 0.4019 MFRTLLLFLFCPTATLLLASSSDVNLNISSVFKDCNSSCDTRLTASNSDDSPNVLRSLEENVTATARARATATTTGPGTATATATANVTVVSPSSQSRPRQSTSPPSISIQPTPSTFLSPPPSTSLSPTLSPARVPTFSSPATQSILIRASGNHQFWKRKVVIGVASAVMGGFMICIIICCFRYKLLTQPIKLCSTTKSDQDIEAFLKNKGAVAQKRYKFSEVKKMTNSFKVKLGQGGFGAVYKGQLVSGCPVAVKLLNSSKGNGEEFINEVATISRTSHVNIVTLLGFCLEGRKKALIYEFMDNGSLEKFIYKKGSQTIVSLSWENLCQISIGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESIISMSDTRGTMGYLAPEMWNRRFGGVSHKSDVYSYGMMLLEMVGGRKNIDAEASHTSEIYFPHLAYKRLELDNDLRTDEVMTTEENEIAKRITIVGLWCIQTFPNNRPTMSRVIEMLEGSMNSLEMPPKPMFSSPTRSATPLEIS* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0813 529 MobiDBLite consensus disorder prediction 89 114 - -
Gso7g0813 529 MobiDBLite consensus disorder prediction 509 529 - -
Gso7g0813 529 Gene3D Phosphorylase Kinase; domain 1 201 302 - -
Gso7g0813 529 CDD STKc_IRAK 234 503 - -
Gso7g0813 529 Pfam Protein tyrosine and serine/threonine kinase 230 501 IPR001245 GO:0004672|GO:0006468
Gso7g0813 529 MobiDBLite consensus disorder prediction 511 529 - -
Gso7g0813 529 Gene3D Transferase(Phosphotransferase) domain 1 303 511 - -
Gso7g0813 529 MobiDBLite consensus disorder prediction 89 135 - -
Gso7g0813 529 ProSitePatterns Protein kinases ATP-binding region signature. 234 256 IPR017441 GO:0005524
Gso7g0813 529 PANTHER RUST RESISTANCE KINASE LR10-RELATED 153 523 IPR045874 GO:0004672
Gso7g0813 529 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 153 523 - -
Gso7g0813 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Gso7g0813 529 ProSiteProfiles Protein kinase domain profile. 228 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0813 529 SUPERFAMILY Protein kinase-like (PK-like) 216 502 IPR011009 -
Gso7g0813 529 SMART serkin_6 228 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0813 Gso-Chr7 9015084 9020876 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0813 160 516 Receptor kinase-like Gene Family AT1G66910 52.473 1.95e-127 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gso7g0813 PK_Tyr_Ser-Thr 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0813 - - gmx:100799268 934.095