Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0812 ATGAGGCTTTTGAGGGTGTTGGGCAAAAGAGTAAGAATGGATTACCATAATCATAATCATATCCATATGCATATTTCTATGCTCCTTATGTCCTTACTCACCGTGTGTTGCTTATTGTTAACCACTTTGCCACACTCTCAGTGTCAACCAACCGCTTTTGATTATTCAATTTGTAAGAAGCAATCATACAACTGCGGAAATCTGTCCAACATATCCTATCCTTTCTGGGGACAGAACCGATCTCCTCAATGTGGCAGTGGCGACCCTTTTGAACTCAGCTGCAATGGTGATGATAATACCACTTCAATTCGAATTGGCTCACTAAATTACACAGTGAAGGAGATCAACATCACAGCTCAAACCATGAGACTGGTGCCAACAAACATAGTTGTCAATGTTTGTTTTCCACAGTATGAGGAGACCTATGAGAGCCGCATTCTGTTCCGTTATTCCCCTTCAGTGTACAACGTTACCATATTCTACAACTGTTCCCGCATCCAATATTTTCCTTATGGATACTTCAGGTGTGGGAATGCAATCTCTTATTTTGCGCGCGCATATGATCGGCTGTTCACCGATTATCCACAGCTTCAGAAGTGCAAGAGAAGTTTAAATGTGTCGGCTGTTGCTCAATTGGATTTTAAGGGTGGTGGAGATTTTGCTTTGAAAAAGAGTCTCAATGAAGGGTTTGAGGTCAACTATAATGTTTCTCAACATTGTCAAAGATGCCTGGGAAGTGAAGGACATTGCTGGAGATATGGTATTGAAAAACATGTACTTTCATGCTACTATTGCCCAAATGGAACTCATGCCCTACACTGTTCTCCTCGTCCTCCCAAAACCATGGCCAGCACTAACAGCAATAAATGGAAAAAAAGTCGGAGGAGACTCGTTATAGGCGTTACAGGTGGAGCAATTGCAGGATTTTTGATATGTATTACGATTCTCTGTTTGTACAAGTTACCAACCTGGAAAGGACATTTTGGGTTGAACACAAATAGTAACAAAAATATTGAAGCTTTGCTGAAAGTTCATGGTGCTATAACTCTAAAAAGATATAAATTGTCAAATGTCAAGAAAATGACAAATAACTTCAAAGTAAAACTGGGGCAAGGTGGTTTTGGCTCTGTCTATAAAGGAAAGCTACCCAATGGCGCTCCTGTGGCTGTAAAAATATTGAATGCATCAAAAAAAGATGGTGAAGAATTTATGAACGAGGTTGCTAGCATTAGTAGAACTTCTCATATTAATGTTGTCACTCTTCTTGGGTTCAGTTTGGAAGGCCGCAAGAGAGTTCTCATCTATGAATTTATGCCCAATGGTTCCCTTGACAAGCTCATTTATAGAAAAGGACCTGAAACCATTGCACCCTTGAGTTGGGACATTATATATGAAATTGCAATTGGTATAGCTAGAGGCTTAGAATACTTGCATATAGGATGCAACACTCGAATTTTGCATTTTGACATAAAACCACATAACATTCTTTTGGATGAGAAGTTCTGCCCCAAGATATCAGATTTTGGGCTAGCCAAGCTCTGTCCTAGAAATGAAAGCATTATTTCTTTGTCAGATGCTAGAGGAACAATGGGGTATGTTGCTCCAGAAGTGTTGAATAGACATTTTGCAGGAGTTTCACTTAAGTCTGATGTTTATAGCTACGGAATGATGCTTCTAGAAATGGTAGGAGGGAGGAAGAACACTAATGCTGAAGCCAGTAACATGAGTGAGATATACTTCCCGCATTGGATATTTAAGAGGCTTAAGTTGGGTAGTGATTTGAGACTAGAAGAAGAGATTGCGCCAGAAGAAAATGAGATAGCAAAGAGATTGGCCATAGTAGGTCTATGGTGCATCCAAACCTTTCCAAATGATAGACCTACAATGAGTAGAGTGATAGATATGTTGGAAGTCAACATCAATTCCCTTGAAATCCCACCAAAACCTTTGCTTTCTTCTCCTACCACATCCCTACCAGAATCTTCTATTTCTTGA 1995 0.3985 MRLLRVLGKRVRMDYHNHNHIHMHISMLLMSLLTVCCLLLTTLPHSQCQPTAFDYSICKKQSYNCGNLSNISYPFWGQNRSPQCGSGDPFELSCNGDDNTTSIRIGSLNYTVKEINITAQTMRLVPTNIVVNVCFPQYEETYESRILFRYSPSVYNVTIFYNCSRIQYFPYGYFRCGNAISYFARAYDRLFTDYPQLQKCKRSLNVSAVAQLDFKGGGDFALKKSLNEGFEVNYNVSQHCQRCLGSEGHCWRYGIEKHVLSCYYCPNGTHALHCSPRPPKTMASTNSNKWKKSRRRLVIGVTGGAIAGFLICITILCLYKLPTWKGHFGLNTNSNKNIEALLKVHGAITLKRYKLSNVKKMTNNFKVKLGQGGFGSVYKGKLPNGAPVAVKILNASKKDGEEFMNEVASISRTSHINVVTLLGFSLEGRKRVLIYEFMPNGSLDKLIYRKGPETIAPLSWDIIYEIAIGIARGLEYLHIGCNTRILHFDIKPHNILLDEKFCPKISDFGLAKLCPRNESIISLSDARGTMGYVAPEVLNRHFAGVSLKSDVYSYGMMLLEMVGGRKNTNAEASNMSEIYFPHWIFKRLKLGSDLRLEEEIAPEENEIAKRLAIVGLWCIQTFPNDRPTMSRVIDMLEVNINSLEIPPKPLLSSPTTSLPESSIS* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0812 664 Pfam Wall-associated receptor kinase C-terminal 195 264 IPR032872 -
Gso7g0812 664 Pfam Wall-associated receptor kinase galacturonan-binding 58 125 IPR025287 GO:0030247
Gso7g0812 664 PANTHER RUST RESISTANCE KINASE LR10-RELATED 286 664 IPR045874 GO:0004672
Gso7g0812 664 SUPERFAMILY Protein kinase-like (PK-like) 347 638 IPR011009 -
Gso7g0812 664 ProSiteProfiles Protein kinase domain profile. 363 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0812 664 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Gso7g0812 664 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 286 664 - -
Gso7g0812 664 Gene3D Transferase(Phosphotransferase) domain 1 438 648 - -
Gso7g0812 664 SMART serkin_6 363 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0812 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Gso7g0812 664 Gene3D Phosphorylase Kinase; domain 1 329 437 - -
Gso7g0812 664 Pfam Protein kinase domain 366 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0812 Gso-Chr7 8988515 8998554 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0812 26 662 Receptor kinase-like Gene Family AT5G38260 37.443 2.12e-135 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gso7g0812 Pkinase 3.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0812 - - gsj:114419144 1283.09