Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0811 ATGTCAAAACCCTTTTGCACCCTCTTTGCACTGTCCATCATCCTTGTGACATGTCATGCTCAAACCCTCAATACATCAACAACATGTGAACCTTCTAAATGTGGTAACCTCAACATCAGCTACCCTTTTTGGAAGAAATCCAACACCAACGTTCAAGAATTTTGCGGTTACCCTGAATTTGGCCTTGAATGTTTGGATGACCAAGCCATCTTGATTTTGCCAACTAACAGATACCAAGTCACGGATATAAACTATGATAATCATTCAATCACACTTATTGACATAGATGTGTTGGGACAACCATGTCCAAGGGCTCGACACAATGTTTCCCTACACAATCTCCCTTTATCTTTCAGCTCATTAGATTTTAACCTCAGTTTCTATTTCAACTGCAGTTCTTACCCTTCATCTATTCAGCACATAGGGTGCATGAAACATGATAAGTATCAGTCTTACGTGTTTAAGACCGGGGATGAAGCTGAAAGTAATGGCTATGATTGGCTTAGACGCTGTGAGGAGCATGTTGTGGTGACAGTGAAGAAGGATGAGATTGAAATTAGTGGTTTGATCACTGGTTTTGGTGATGCTATGCAGAAAGGATTCGTGCTTGATTGGATGAGAGCTCAGGATTGTGCAGTGTGCGAGGAGTCTAATGGCTATTGCAGATTCGACCAAGCCACTAAGCAATCGAGGTGTTTATGCTCAGAAGGCAGAACTGAAGCCAAAAGTTGCAAAAAAGGAAAAATTAATTGGAAGGTGAAACTCCTTATAGCTATCACAACTGGAGTAATGGGAGGATTCATGATATGCATCATAATTTGCTGTACTAAATGTATGTCATCAACAAAAGTAAAACTTTGGTTTACGTTAAAGAATGACCAACGTATAGAATCGTTCTTAAAACATCATGGAGCACTAGCACAGAAGAGATATAAATTTTCCGAAGTTAAGAAAATGACCAACTCCTTCAAAGTTAAACTGGGTGAAGGTGGTTTTGGTGCTGTATACAAAGGAGAGCTACTCAGTGGTTGCCCTGTGGCTGTAAAGATATTGAATGCATCCAAAGGAAATGGCGAAGAGTTCATCAATGAGGTTGCTAGCATCAGTAGAACTTCTCATGTTAATATTGTCACACTTCTTGGATTCAGTTTGGAAGGACGCAAAAAAGCTCTCATTTATGAGTTTATGCCCAATGGTTCCCTTGACAAGTTTATTTACAATAAGGGTCTGGAAACCACTGCATCCTTGAGTTGGGATAATTTGTGGCAAATTGCAATAGGTATAGCCCGAGGACTAGAGTACTTGCATAGTGGTTGCAACACTCGAATTTTACATTTTGACATAAAACCACATAACATTCTTTTGGATGAGAATCTATGTCCCAAGATATCAGATTTCGGGCTTGCAAAGCTTTTTCCCAGGAAAGATAGCATTGTTTCCCTGTCATATGCTAGGGGAACAATAGGATATGTAGCTCCAGAAGTGTGCAACAAACACTTCGGTGGAATTTCACACAAATCTGATGTCTACAGCTATGGAATGATGCTGCTAGAAATGGTGGGAGTGAAGAAGAATATTAATGCAGAAACCAGTCAAACAAGTGAGTACTTCCCAGATTGGATATACAAAAGGCTAGAGCAGGGCAGAGATTTGACAACTGATGGGGTGATAGCCACACAAGAAACAGAGATAGCAAGGAAAATGACTATAGTGGGTTTATGGTGTGTTCAAACAATTCCACAAGATAGACCAACAATGAGCAAAGTAATAGAGATGCTAGAAGGCAACATGAATTCCCTTGAAATGCCCCCAAAATCTGTTCTTTCTTCTCCAGCTAGATCGGTTCCAGAATTTACCACTAGTTCATTGCAATCTGGGTAG 1881 0.4014 MSKPFCTLFALSIILVTCHAQTLNTSTTCEPSKCGNLNISYPFWKKSNTNVQEFCGYPEFGLECLDDQAILILPTNRYQVTDINYDNHSITLIDIDVLGQPCPRARHNVSLHNLPLSFSSLDFNLSFYFNCSSYPSSIQHIGCMKHDKYQSYVFKTGDEAESNGYDWLRRCEEHVVVTVKKDEIEISGLITGFGDAMQKGFVLDWMRAQDCAVCEESNGYCRFDQATKQSRCLCSEGRTEAKSCKKGKINWKVKLLIAITTGVMGGFMICIIICCTKCMSSTKVKLWFTLKNDQRIESFLKHHGALAQKRYKFSEVKKMTNSFKVKLGEGGFGAVYKGELLSGCPVAVKILNASKGNGEEFINEVASISRTSHVNIVTLLGFSLEGRKKALIYEFMPNGSLDKFIYNKGLETTASLSWDNLWQIAIGIARGLEYLHSGCNTRILHFDIKPHNILLDENLCPKISDFGLAKLFPRKDSIVSLSYARGTIGYVAPEVCNKHFGGISHKSDVYSYGMMLLEMVGVKKNINAETSQTSEYFPDWIYKRLEQGRDLTTDGVIATQETEIARKMTIVGLWCVQTIPQDRPTMSKVIEMLEGNMNSLEMPPKSVLSSPARSVPEFTTSSLQSG* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0811 626 MobiDBLite consensus disorder prediction 612 626 - -
Gso7g0811 626 Gene3D Transferase(Phosphotransferase) domain 1 396 606 - -
Gso7g0811 626 Pfam Wall-associated receptor kinase C-terminal 146 236 IPR032872 -
Gso7g0811 626 ProSiteProfiles Protein kinase domain profile. 321 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0811 626 Pfam Protein tyrosine and serine/threonine kinase 323 593 IPR001245 GO:0004672|GO:0006468
Gso7g0811 626 Gene3D Phosphorylase Kinase; domain 1 295 395 - -
Gso7g0811 626 MobiDBLite consensus disorder prediction 601 626 - -
Gso7g0811 626 Pfam Wall-associated receptor kinase galacturonan-binding 29 94 IPR025287 GO:0030247
Gso7g0811 626 PANTHER - 14 621 - -
Gso7g0811 626 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 621 IPR045874 GO:0004672
Gso7g0811 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Gso7g0811 626 SUPERFAMILY Protein kinase-like (PK-like) 305 594 IPR011009 -
Gso7g0811 626 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Gso7g0811 626 SMART serkin_6 321 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0811 Gso-Chr7 8966038 8979156 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0811 7 622 Receptor kinase-like Gene Family AT5G38260 39.717 1.26e-146 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gso7g0811 PK_Tyr_Ser-Thr 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0811 - - gmx:100796618 1246.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g0375 8 3540246 3542997 Gso7g0811 7 8966038 8979156 PCT