Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0810 ATGCGCGCAAGAGAAACAATGGATTGCAAAGAGCATATCCCCATGCTCCGTACGGTGGTACTCACCGTCTCTTGGTTGTTGTTAATCACTCTGCTATACTGTGAAGCCGCATACAATTATTCGGAATGCAAAGAGCAAACATACAAATGCGGAAGTCTGATCAACATATCGTATCCTTTCTGGGGACACGACCAGCGAGACTCTGAATGTGGTGGCGGTGACCTATTCGAGCTCAAATGCTATGATGATGATACTACACTTCTAATTGGCTCTCAAAATTACACGGTGAAGGAGATCAACATCGCCACTTACACCATGAGACTGGTCCGAACAGACCTTGCCCGTGATGTTTGCTCTCCGCAATTTGGTGACACTTATCTGAACCCTACTCTGTTCTCGTATCCCCCTGAAGTGCACAACGTCACCATATTCTACGATTGTACCCCCATCACAAATCCACAGTTTCCAAACAGCATTACGTGCGGGTATGCTGTCCCTAATATTGGGGAGGGATTTCAGTATTCACTTATAGAGCAGTGCAAGCGACGTTTGCACGTGCCGACTGACGATCCTGAAGTAGATTATGGTGGTGGTAAAAATTCTGCTGTCGAAAAGGCTCTTGATAAAGGGTTTGAGGTCAAGTATACTGTTTCTCAAGATTGCACAACATGCCTGGGAAGTGAAGGAAATTGCTCGAGACATGATGCTCATTTTTACCAAAATTTATGCCATTATTGCCCTGATGGATCTCACGCCCTACACTGTTCTAAAATGCAGTATACAGTTACTGGTAATTCGATTGTGCCTCTCTTCAGATATCATGCCATAGCCATTAGCGTGTGCTTTCTTCATGGGGCCTTCGGTGAAAGAAAAATTAATTGGAAGGTGAAACTCCTTATAGGTATCACAGCTGGAGTAATGGGAGGATTCATGATATGCATCATAATTTGCTCTACTAAACGTAAGTCATCAACAAAAGTAAAACATTGGTTTACGATAAAGAATGAAAAAGTTATAGAATCATTCTTAAAACATCATGGAGCACTGGCACAGAAGAGGTATAAATTTTCCGAAGTTAAGAAAATGACCAACTCCTTCAAAGTTAAACTGGGTGAAGGCGGTTTTGGTGCCGTATACAAAGGAGAGATACACAGTGGTTGCCCTGTGGCTGTAAAGATATTGAATGCATCCAAAGGAAATGGCGAAGACTTCATCAATGAGGTTGCTAGCATCAGTAGAACTTCTCATGTTAATGTTGTCACACTTCTTGGATTCAGTTTGGAAGGACGCAAAAAAGCTCTCATTTATGAGTTTATGCCCAATGGTTCCCTAGACAAGTTTATTTACAATAAGGGTCTTGAAACCACTGCATCCTTGAGTTGGGATAATTTGTGGCAAATTGCAATAGGTATAGCCCGAGGATTAGAGTACTTGCATAGTGGTTGCAATACTCGAATTTTACATCTTGACATAAAACCACAAAACATTCTTTTGGATGAGAATCTATGTCCCAAGATATCAGATTTCGGGCTTGCAAAGCTTTTTCCCAGGAAAGATAGCATTGTTTCCCTGTCATATGCTAGGGGAACAATAGGATATGTAGCTCCAGAAGTGTGCAACAAACACTTTGGTGGAATTTCACACAAATCTGATGTCTACAGCTATGGAATGATGCTGCTAGAAATGGTGGGAGTGAAGAAGAATATTAATGCAGAAACCAGTCAAACAAGTGAGTACTTCCCAGATTGGATATACAAAAGGCTAGAGCAGGGCAGAGATTTGACAACTGATGGGGTGATAGCCACACAAGAAACAGAGATAGCAAGGAAAATGACTATAGTGGGTTTATGGTGTGTTCAAACAATTCCACAAGATAGACCAACAATGAGCAAAGTAATAGATATGCTAGAAGGCAACATGAATTCCCTAGAAATGCCCCCAAAACCTATTCTTTCTTCTCCAGCTAGATTGGTTCCAGAATTTACCACTAGTTCATTGCAATCTGGGTAG 2010 0.4159 MRARETMDCKEHIPMLRTVVLTVSWLLLITLLYCEAAYNYSECKEQTYKCGSLINISYPFWGHDQRDSECGGGDLFELKCYDDDTTLLIGSQNYTVKEINIATYTMRLVRTDLARDVCSPQFGDTYLNPTLFSYPPEVHNVTIFYDCTPITNPQFPNSITCGYAVPNIGEGFQYSLIEQCKRRLHVPTDDPEVDYGGGKNSAVEKALDKGFEVKYTVSQDCTTCLGSEGNCSRHDAHFYQNLCHYCPDGSHALHCSKMQYTVTGNSIVPLFRYHAIAISVCFLHGAFGERKINWKVKLLIGITAGVMGGFMICIIICSTKRKSSTKVKHWFTIKNEKVIESFLKHHGALAQKRYKFSEVKKMTNSFKVKLGEGGFGAVYKGEIHSGCPVAVKILNASKGNGEDFINEVASISRTSHVNVVTLLGFSLEGRKKALIYEFMPNGSLDKFIYNKGLETTASLSWDNLWQIAIGIARGLEYLHSGCNTRILHLDIKPQNILLDENLCPKISDFGLAKLFPRKDSIVSLSYARGTIGYVAPEVCNKHFGGISHKSDVYSYGMMLLEMVGVKKNINAETSQTSEYFPDWIYKRLEQGRDLTTDGVIATQETEIARKMTIVGLWCVQTIPQDRPTMSKVIDMLEGNMNSLEMPPKPILSSPARLVPEFTTSSLQSG* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0810 669 Pfam Wall-associated receptor kinase C-terminal 174 248 IPR032872 -
Gso7g0810 669 ProSiteProfiles Protein kinase domain profile. 364 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0810 669 SMART serkin_6 364 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0810 669 SUPERFAMILY Protein kinase-like (PK-like) 350 637 IPR011009 -
Gso7g0810 669 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Gso7g0810 669 Gene3D Phosphorylase Kinase; domain 1 339 438 - -
Gso7g0810 669 PANTHER RUST RESISTANCE KINASE LR10-RELATED 290 665 IPR045874 GO:0004672
Gso7g0810 669 PANTHER RUST RESISTANCE KINASE LR10-RELATED 19 258 IPR045874 GO:0004672
Gso7g0810 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Gso7g0810 669 Gene3D Transferase(Phosphotransferase) domain 1 439 646 - -
Gso7g0810 669 Pfam Protein tyrosine and serine/threonine kinase 366 636 IPR001245 GO:0004672|GO:0006468
Gso7g0810 669 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 290 665 - -
Gso7g0810 669 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 19 258 - -
Gso7g0810 669 Pfam Wall-associated receptor kinase galacturonan-binding 43 110 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0810 Gso-Chr7 8915130 8942983 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0810 22 665 Receptor kinase-like Gene Family AT5G38260 36.787 2.38e-140 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gso7g0810 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0810 - - gmx:106794113 1160.21