Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso7g0809 | ATGTCAATACTCAATAATCATATCCCCATGCTCCTTACGTCCCTACGCACCATCTCTTGGTTATTGTTAACCACTTTGCCTCAGTCTCAGTCTCAAACACCCGCTGATCACAGTTTTTCTGTTTGTAATGAGCAGTCATACAACTGCGGAACATTGTCCAACATCTCCTATCCTTTCTGGGGACTCAACCGATCCCGTCAATGTGGCCGCGGTGGTGACGCATTCAAGCTCACATGCCATGATGATAAGACTACTTCAATCCGAATTGCCACTCAAAATTTCACAGTGAAGGACATCAACATCACCGCTCAAACCATGATATTGGTGCGAGCAGACCTTGCCCTCAACGTTTGTTCTCCACAATTTGGGGACACTTATTTGAGTCCTAGTCTGTTCCAGTATGGTTCATCCGTGTACAACATCACCATATTCTACAATTGCTCCTCCACATCCAATATAGATACCAGTCTTGCGGCATTCAAGTGCGGATATGAGAATACTCTCTTTACTGATGGTGTAGAATATGAGCTGTTGAGAACATTTCCATGGCTTGAGAGATGCGGGCGACAAGTCCAAGTGCCGCTAGATGTTGTTTATGATAGTAACGGTGGGCGTGATTTTCTGAAACAAGCTTTCACTAGCGGCTTTCTGGTCAACTATACTGTTCTCAACACTGTTACTGTTGACAATAGTAAAGTTAATTTGACAAGGAAAATCATCGTAGCTGTTGGTGTGGTAATGGGAGGATTCATAACATGCATCGTAATAATTTACTGTTGTAGCTGTAAATATATGTCATCAACACAAGTAAAATTTTGGTTGACGGGAAAGAATGACCTAGATATCGAAGCATTCTTAAAAGATCGTGGAACTCTAGCACAAAAGAGATATAAATTTTCAGAAGTCAAGAAAATGACCAACTCCTTCAAAGTTAAACTGGGTGAAGGTGGCTTTGGTGCTGTATACAAAGGAGAGCTACTCAGTGGTTGCCCTGTGGCCGTAAAAATATTAAATTCATCTAAAGGAAATGGTGAAGGCTTTATCAATGAGGTTTCTAGCATTAGTAGAACTGCTCATGTTAATGTTGTCACACTTTTTGGATTCTGCTTGGAAGGCAGCAAGAAAGCTCTCATCTATGAATTTATGCATAATGGTTCCCTTGACAAGTTTATTTACAACAAGGGACTTGAAGCTACTGCATCATTGAGTTGGGATAATTTGTGGCAAATTTCCTTAGGGATAGCCCGAGGACTAGAGTATTTGCATAGGGGATGCAACACTCGTATCTTACATTTTGATATAAAACCACATAACATTCTTCTGGACGAGAACTTTTGCCCCAAGATATCAGATTTTGGGCTTGCAAAGCTTTGTCCTAGGAAAGAGAGCATTATTTCCATGTCATATGCTAGAGGGACAGTAGGATATGTTGCTCCAGAAGTGTGCAACAAACACTTTGGTGGAATTTCACACAAATCTGATGTCTACAGCTATGGAATGATGCTGCTTGAAATGGTGGGAGTGAAGAAGAATATTAATGCAGAAGTCAGTCAGACAAGTGAGTACTTCCCAGATTGGATATATAGCAGGCTAGAGCAGGGTGGAGATTTGACAACTGATGGGGAGATAGCCACAGAAGAAAAAGAGATGGCAAGGAGAATGACTATAGTGGGCTTATGGTGTGTTCAAACAATTCCACAAGATAGACCTACAATGAGTAGAGTAATAGATATGCTAGAAGGCAGCATGAATTCCCTAGAAATGCCTCCAAAACCTGTTCTTTCTTCTCCAGCTAGATCGGTGCCAGAATTTACCACTAGTTCTTTGCAATCTGGGTAG | 1839 | 0.4133 | MSILNNHIPMLLTSLRTISWLLLTTLPQSQSQTPADHSFSVCNEQSYNCGTLSNISYPFWGLNRSRQCGRGGDAFKLTCHDDKTTSIRIATQNFTVKDINITAQTMILVRADLALNVCSPQFGDTYLSPSLFQYGSSVYNITIFYNCSSTSNIDTSLAAFKCGYENTLFTDGVEYELLRTFPWLERCGRQVQVPLDVVYDSNGGRDFLKQAFTSGFLVNYTVLNTVTVDNSKVNLTRKIIVAVGVVMGGFITCIVIIYCCSCKYMSSTQVKFWLTGKNDLDIEAFLKDRGTLAQKRYKFSEVKKMTNSFKVKLGEGGFGAVYKGELLSGCPVAVKILNSSKGNGEGFINEVSSISRTAHVNVVTLFGFCLEGSKKALIYEFMHNGSLDKFIYNKGLEATASLSWDNLWQISLGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESIISMSYARGTVGYVAPEVCNKHFGGISHKSDVYSYGMMLLEMVGVKKNINAEVSQTSEYFPDWIYSRLEQGGDLTTDGEIATEEKEMARRMTIVGLWCVQTIPQDRPTMSRVIDMLEGSMNSLEMPPKPVLSSPARSVPEFTTSSLQSG* | 613 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso7g0809 | 612 | Pfam | Protein tyrosine and serine/threonine kinase | 309 | 579 | IPR001245 | GO:0004672|GO:0006468 | |
Gso7g0809 | 612 | Gene3D | Transferase(Phosphotransferase) domain 1 | 382 | 589 | - | - | |
Gso7g0809 | 612 | Gene3D | Phosphorylase Kinase; domain 1 | 285 | 381 | - | - | |
Gso7g0809 | 612 | Pfam | Wall-associated receptor kinase galacturonan-binding | 42 | 109 | IPR025287 | GO:0030247 | |
Gso7g0809 | 612 | PANTHER | GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED | 236 | 608 | - | - | |
Gso7g0809 | 612 | PANTHER | GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED | 8 | 220 | - | - | |
Gso7g0809 | 612 | SMART | serkin_6 | 307 | 579 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso7g0809 | 612 | SUPERFAMILY | Protein kinase-like (PK-like) | 295 | 580 | IPR011009 | - | |
Gso7g0809 | 612 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 429 | 441 | IPR008271 | GO:0004672|GO:0006468 | |
Gso7g0809 | 612 | MobiDBLite | consensus disorder prediction | 587 | 612 | - | - | |
Gso7g0809 | 612 | ProSitePatterns | Protein kinases ATP-binding region signature. | 313 | 335 | IPR017441 | GO:0005524 | |
Gso7g0809 | 612 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 236 | 608 | IPR045874 | GO:0004672 | |
Gso7g0809 | 612 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 8 | 220 | IPR045874 | GO:0004672 | |
Gso7g0809 | 612 | ProSiteProfiles | Protein kinase domain profile. | 307 | 594 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso7g0809 | Gso-Chr7 | 8901504 | 8907107 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso7g0809 | 46 | 608 | Receptor kinase-like Gene Family | AT5G38260 | 38.602 | 2.45e-136 | 410 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Gso7g0809 | PK_Tyr_Ser-Thr | 2.5e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso7g0809 | - | - | gmx:100793451 | 1216.45 |