Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0808 ATGGATGAGCATAATCACATCCATATGCATATTCCCATGCTTCTTACATCCATAGTTATATTGTTAACCACTTTGCCACAGTCCTACTGTGATTTCGATTATTCTGTTTGTAAGGAGAGGCCATACAACTGCGGGAACCTGTCCGACATCTTCTATCCTTTCTGGGGACAGAACCGACCTCTTCAATGTGGCGGCGGTGGCCAAACATTCGAACTCAAATGCCATGATGACGATAATACTACAATTCTAATTGGCTCACAAAATTTCACAGTGAAGGAGATTAACACCAACGCTCAAACCATGAGAGTGGTACAAACAGACCTTGTCCTCAATTTTTGTTCTCCGCAATTTGAGGACACTTACGTAAACTCCACTCAGTTCCGGTACTCCCCTTCAGTGTACAACATCACCATATTCTACGATTGTCTGCGCATGACAGATTTCCCTCATGGTTTTGGACAGAACTTTACGTGCGGGGATGTTTTGTCTTATTTTGTAGTGGAATATGATGAGGTGCTGTCAAATGAATTTCCGCGTTGCAAGCGACGTTCACACGTGCCGGCTGAGGCTCCTCTGGATTATACTGCTCCTGGTGCCGGATATAATAATTTGATACAAGTTATTGATAGAGGGTTTGAGTTCAGGTATGATGTTTCTCAAGATTGCACAAGATGCCTGGGAAGTGAAGGAGAATGCTGGAGCGATTGTAATGATATTGATCAAAATGTACTTTCATGTTATTATTGTCCAGATGGATCTCATGCCCTGCACTGTTCTCCTTCCAAAAGTGAACATAATATATCAAGGAAAATCATCATCTTATTAGGTGTTGCAAGTGTGGTAATTGGGGGCTTCATGATATGCATCATTATTTGCTGTAGTAAATATTGGCCAACAGATCAAGTAAAATTTTGGTTGACGATAAAAAGAAATCGGGATATTGAATCATTCTTAGAAAACCATGGAGCCTTAACTCTAAAAAGATATAAATTCTCAGATGTTAAGAAAATGACTAACTCTTTCAATATTAAATTGGGACAAGGTGGCTTTGGTAGTGTGTACAAAGGAGAACTTACTGGTTGTCCAGTGGCAGTGAAGTTATTGAATTCATCCAAAGGACATGGAGAAGAATTTATCAATGAGGTTGCTAGCATCAGCAAAACTTCTCATGTTAATGTTGTTACACTTCTTGGATTCTGTTTGGAAGGCAGCAAGAAAGCTCTCATCTATGAATTTATGCATAATGGTTCCCTTGACAAGTTTATTTACAGCAAGGGACTTGAAGCCACTCCATCGTTGAGTTGGGATAATTTGTGGCAAATTGTCTTAGGGATAGCCAGAGGACTAGAGTACTTGCATAGGGGTTGCAACACTCGAATTTTACATTTTGACATAAAACCACATAACATTCTATTGGATGAGAATCTATGTCCCAAGATATCAGATTTTGGGTTTGCAAAGCTTTGTCCCAGGAAAAAGAGCACTATTTCCATGTCAGATGCTAGAGGAACAATTGGGTATGTAGCTCCTGAAGTGTGGAATAGACATTTTGGTGGAATTTCACACAAATCTGATGTTTATAGTTATGGAATGATGTTGCTAGAAATGGTAGGAGGGAGGAAAAATATTAATGCTGAAGCAAGTCACACAAGTGAGATATTCTTCCCACACTGGGTATATAACAGGCTAGAGCATGACAGTGACTTGAGGCCTGATGGGGTGATGGCCATAGAAGAAAATGAGGTAGCAAGGAGAATGACTCTAGTCGGTTTATGGTGCGTTCAAACGATTCCAAAAGATAGACCTACAATGAGCAAAGTAATAGATATGCTAGAAGGCAACATAAATTCCCTTGAAATGCCCCCAAAGCCTATGCTTTCTTCTCCCACTAGATCAGTGCCAAAATCTCCCATTAGTTAA 1920 0.4005 MDEHNHIHMHIPMLLTSIVILLTTLPQSYCDFDYSVCKERPYNCGNLSDIFYPFWGQNRPLQCGGGGQTFELKCHDDDNTTILIGSQNFTVKEINTNAQTMRVVQTDLVLNFCSPQFEDTYVNSTQFRYSPSVYNITIFYDCLRMTDFPHGFGQNFTCGDVLSYFVVEYDEVLSNEFPRCKRRSHVPAEAPLDYTAPGAGYNNLIQVIDRGFEFRYDVSQDCTRCLGSEGECWSDCNDIDQNVLSCYYCPDGSHALHCSPSKSEHNISRKIIILLGVASVVIGGFMICIIICCSKYWPTDQVKFWLTIKRNRDIESFLENHGALTLKRYKFSDVKKMTNSFNIKLGQGGFGSVYKGELTGCPVAVKLLNSSKGHGEEFINEVASISKTSHVNVVTLLGFCLEGSKKALIYEFMHNGSLDKFIYSKGLEATPSLSWDNLWQIVLGIARGLEYLHRGCNTRILHFDIKPHNILLDENLCPKISDFGFAKLCPRKKSTISMSDARGTIGYVAPEVWNRHFGGISHKSDVYSYGMMLLEMVGGRKNINAEASHTSEIFFPHWVYNRLEHDSDLRPDGVMAIEENEVARRMTLVGLWCVQTIPKDRPTMSKVIDMLEGNINSLEMPPKPMLSSPTRSVPKSPIS* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0808 639 Pfam Wall-associated receptor kinase galacturonan-binding 37 104 IPR025287 GO:0030247
Gso7g0808 639 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 635 IPR045874 GO:0004672
Gso7g0808 639 ProSiteProfiles Protein kinase domain profile. 339 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0808 639 Pfam Wall-associated receptor kinase C-terminal 172 248 IPR032872 -
Gso7g0808 639 Gene3D Phosphorylase Kinase; domain 1 314 412 - -
Gso7g0808 639 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 14 635 - -
Gso7g0808 639 SUPERFAMILY Protein kinase-like (PK-like) 323 612 IPR011009 -
Gso7g0808 639 MobiDBLite consensus disorder prediction 619 639 - -
Gso7g0808 639 ProSitePatterns Protein kinases ATP-binding region signature. 345 366 IPR017441 GO:0005524
Gso7g0808 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Gso7g0808 639 Gene3D Transferase(Phosphotransferase) domain 1 413 627 - -
Gso7g0808 639 SMART serkin_6 339 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0808 639 Pfam Protein kinase domain 344 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0808 Gso-Chr7 8896485 8900179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0808 17 635 Receptor kinase-like Gene Family AT5G38260 37.834 1.86e-139 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gso7g0808 Pkinase 6.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0808 - - gmx:100792936 1322.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0808 7 8896485 8900179 Gso8g0374 8 3533530 3537520 PCT