Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0799 ATGAGTTTCCTCCGCAGGTTGTGCCCCTGTTTGCACAAGGGCGGCGCAGCCTTCCACGACGGCGATGACGACGACGTAGATCGCAACCACCCCGGCGACTCCTTCGACCTAATCTTCGGCCTCCACACTCTCCAACTCGCCACCAACTTCTTCTCCGACATCAACCGGCTAGGTCATGGAGGCTTTGGTCCTGTTTTCAGGGGATTGATGCCAAATGGTCAAGAAGTGGCGGTTAAGAAGCTGTCATTGGAATCTAGGCAAGGAGATAGAGAATTCACCAATGAAGTCAGGCTATTACTCAGAATTCAGCACAAGAACTTGGTTACATTACTGGGTTGTTGTGCAGAAGGGCCTGAAAAGATGCTTGTATATGAGTATCTGCCTAACAAAAGCCTTGATCGCTTTCTGTTTGATAAGAGAAGGTCTTCATCTTTGGACTGGGCAACGCGATTTAGAATAGTTACAGGTGTGGCAAGAGGACTTCTCTACCTGCATGAAGAGGCCCCGGAAAGAATTATTCACAGGGACATTAAAGCTAGTAACATATTGCTGGATGAGAAATTAAATCCGAAAATTTCGGACTTTGGTTTGGCAAGGTTGTTTCCTGGGGAGGACACTTATATGCAGACATTTAGGATTTCTGGTACACATGGTTACATGGCCCCTGAATATGCATTGCATGGATATCTGTCTGTGAAGACAGATGTTTTCAGTTATGGAGTCCTGCTGTTGGAAATAGTTAGTGGGAGAAAAAACCATGATATGCAGCTTGGTTCAGAAAAGGCAGATCTCCTGAGCTATGCGTGGTCGCTTTATCAAGGAAGGAAGATAATGGACTTAATTGACCCAACCCTTGGTAGATATAATGGTGATGAGGCAGCAATGTGCATTCAGCTAGGTTTGTTGTGCTGTCAAGCAAGCATAATTGAAAGACCTGACATGAATAATGTTAATCTCATGCTCTCAAGTGATTCCTTCACTTTGCCAAGACCAGGAAAACCAGGAATTCAAGGTCGTGCAGGACGTTGGAATACAACCTCAACTTCTGCTTTGACCAATACCAATGCTAGTAGTGCTACCAGGGTCTCAGGTGGTAGTGGTAGTTTTGTAGAGGATTATTCTAGAAATTCTATATCCACCTCTTCTTTTGATGAAGGAAGATGA 1164 0.4493 MSFLRRLCPCLHKGGAAFHDGDDDDVDRNHPGDSFDLIFGLHTLQLATNFFSDINRLGHGGFGPVFRGLMPNGQEVAVKKLSLESRQGDREFTNEVRLLLRIQHKNLVTLLGCCAEGPEKMLVYEYLPNKSLDRFLFDKRRSSSLDWATRFRIVTGVARGLLYLHEEAPERIIHRDIKASNILLDEKLNPKISDFGLARLFPGEDTYMQTFRISGTHGYMAPEYALHGYLSVKTDVFSYGVLLLEIVSGRKNHDMQLGSEKADLLSYAWSLYQGRKIMDLIDPTLGRYNGDEAAMCIQLGLLCCQASIIERPDMNNVNLMLSSDSFTLPRPGKPGIQGRAGRWNTTSTSALTNTNASSATRVSGGSGSFVEDYSRNSISTSSFDEGR* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0799 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Gso7g0799 387 CDD STKc_IRAK 57 321 - -
Gso7g0799 387 SUPERFAMILY Protein kinase-like (PK-like) 35 321 IPR011009 -
Gso7g0799 387 MobiDBLite consensus disorder prediction 331 368 - -
Gso7g0799 387 SMART serkin_6 51 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0799 387 Pfam Protein tyrosine and serine/threonine kinase 55 253 IPR001245 GO:0004672|GO:0006468
Gso7g0799 387 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 385 - -
Gso7g0799 387 Gene3D Phosphorylase Kinase; domain 1 27 126 - -
Gso7g0799 387 Gene3D Transferase(Phosphotransferase) domain 1 127 327 - -
Gso7g0799 387 MobiDBLite consensus disorder prediction 340 368 - -
Gso7g0799 387 ProSiteProfiles Protein kinase domain profile. 51 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0799 387 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0799 Gso-Chr7 8791585 8793978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0799 37 336 Receptor kinase-like Gene Family AT4G21410 53.618 6.23e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso7g0799 PK_Tyr_Ser-Thr 7.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0799 - - gmx:100790304 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0799 7 8791585 8793978 Gso7g0799 7 8791585 8793978 ECH