Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0798 ATGTACACATCGAGGAAGAAAATTCACAAGGATAAGGATGCTGAGCCAACTGAATTTGAGGAATCAGTTGGACAGGCATTGTTTGATCTAGAAAATACCAACAATGAGCTGAAAAGTGATCTGAAAGATTTATACATAAACTCAGCTGTCCAAATTGATGTTTCTGGCAACCGAAAGGCTGTGGTTATCCATGTCCCCTACAGACTAAGGAAAGGATTCCGGAAGATTCATGTCAGGCTTGTGAGAGAACTTGAGAAAAAGTTTAGTGGAAAAGATGTAATCTTGATTGCCACCAGGAGGATAGTAAGGCCACCAAAGAAAGGTTCTGCTGTTCAGCGCCCCCGCACCAGAACACTCACTGCTGTACATGAGGCAATGCTGGAAGATATTGTATTGCCTGCTGAGATTGTTGGAAAGCGTGTTAGGTATAAAATTGATGGTTCCAAGATTATGAAGGTCTTTTTGGACCCCAAGGAGCGAAACAATACCGAGTACAAGTTGGAGACTTTTGCTGCAGTATACAGGAAACTTTCAGGCAAAGATGTCGTGTTTGAGTATCCTACTACCGAGGCTTAG 576 0.4253 MYTSRKKIHKDKDAEPTEFEESVGQALFDLENTNNELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAVQRPRTRTLTAVHEAMLEDIVLPAEIVGKRVRYKIDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFEYPTTEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0798 191 Coils Coil 27 47 - -
Gso7g0798 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gso7g0798 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gso7g0798 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
Gso7g0798 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0798 Gso-Chr7 8787194 8789603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0798 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 79.058 4.30e-113 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0798 K02993 - gmx:100527642 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0798 7 8787194 8789603 Gso7g0798 7 8787194 8789603 ECH