Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0797 ATGAGACTAGCCATGTCTACTCCTTCCAAGAGCATAATCTGTTCAAGTGAAGATGATTATGAACTTAGAAGAGGGCCATGGAGTGTTGAAGAGGATTATCTTCTCACCCATTACATTGCCAATCATGGTGAAGGGAGATGGAATTTGCTTGCTATACGTTCAGGACTAAGGAGAACAGGTAAGAGTTGCAGATTGAGATGGCTCAATTATCTAAAGCCAAATGTTAAGAGAGGAAATTTAACCTCGGAAGAGCAGCTTTTGATTTTTGAACTACACTCAAAGTGGGGCAACAGGTGGTCAAAAATTGCGCAACAGCTGCCAGGCAGAACAGACAATGAAATCAAGAACTATTGGAGAACAAGGATTCAGAAACAAGCAATATATGCGAAATTTGAGGATCACAGAAGAGCAGGATTTGTAGAATTTGTCAAGGGTCTACAGATGACAAGATGTCTTCATAAATCACAAGAATCATCTCCTTCGGCCATGTCAACCCAAGACCAAGCAATTCCTTTACCTTTTGATGGTGTTACTGTTCCTCATTATTCATCATTTGGGATTGGGACAACACCAACAATACAAATCACTTGCCATGGAGATCTCAATCATTTGAATCAGCATGAGCAGAACTCAGACTCTGAACACCACAATAGTTCATGCATTTCCTCTTCAGAATCAGCAAATATCCCAAATATGAGTCAGCCTTTTGGATACACTACTAGTCAATTTCAGGCCTTAGATAACTGTGACTTTGGCATGTGTTTATATGATGGCTATAGCATAGATAACAATTCCTATGACAGGGATGCCTTGAACCTGACAACCACAATGGTTGCTGGGAATCTGGAACTCCCAGTGTTTGATTGCCAAACATTAGAAACCAATAGGCTAAACAAGGAATTTGCAAGTAGCACATGGAGCATGGATGAATTATGA 936 0.4028 MRLAMSTPSKSIICSSEDDYELRRGPWSVEEDYLLTHYIANHGEGRWNLLAIRSGLRRTGKSCRLRWLNYLKPNVKRGNLTSEEQLLIFELHSKWGNRWSKIAQQLPGRTDNEIKNYWRTRIQKQAIYAKFEDHRRAGFVEFVKGLQMTRCLHKSQESSPSAMSTQDQAIPLPFDGVTVPHYSSFGIGTTPTIQITCHGDLNHLNQHEQNSDSEHHNSSCISSSESANIPNMSQPFGYTTSQFQALDNCDFGMCLYDGYSIDNNSYDRDALNLTTTMVAGNLELPVFDCQTLETNRLNKEFASSTWSMDEL* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0797 311 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 6 310 IPR044676 GO:0003700|GO:0006355|GO:0043565
Gso7g0797 311 SMART sant 23 73 IPR001005 -
Gso7g0797 311 SMART sant 76 124 IPR001005 -
Gso7g0797 311 Gene3D - 21 77 - -
Gso7g0797 311 CDD SANT 81 120 IPR001005 -
Gso7g0797 311 PANTHER TRANSCRIPTION FACTOR MYB21-LIKE 6 310 - -
Gso7g0797 311 ProSiteProfiles Myb-like domain profile. 19 71 IPR001005 -
Gso7g0797 311 SUPERFAMILY Homeodomain-like 21 118 IPR009057 -
Gso7g0797 311 ProSiteProfiles Myb-like domain profile. 72 122 IPR001005 -
Gso7g0797 311 CDD SANT 26 71 IPR001005 -
Gso7g0797 311 Pfam Myb-like DNA-binding domain 77 120 IPR001005 -
Gso7g0797 311 Pfam Myb-like DNA-binding domain 24 71 IPR001005 -
Gso7g0797 311 MobiDBLite consensus disorder prediction 204 225 - -
Gso7g0797 311 Gene3D - 81 123 - -
Gso7g0797 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 71 IPR017930 -
Gso7g0797 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 126 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0797 Gso-Chr7 8783652 8785075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0797 19 260 MYB Transcription Factor Family AT1G68320 45.703 1.02e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso7g0797 Myb_DNA-binding 3.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0797 K09422 - gmx:100804227 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0797 7 8783652 8785075 Gso7g0797 7 8783652 8785075 ECH