Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0787 ATGCGCTTGAGCTGCAATGGATGCCGCGTTCTCCGCAGAGGGTGCACCACTGAGTGCCCCATTCGCATCTCCCTCCAATGGATCAATTCCCCTAACTCCCAATCCAACGCAACCCTCTTCCTTGCAAAGTTCTATGGCCGCCAAGGCCTCCTCACCCTCCTCACCAACGCTCCCTCACAACTACAACAAGCCGTTTTAAAATCTTTGCTTTACGAAGCATGCGGTCGAATAGTGAACCCGGTTCTCGGCTCGACCGGGTTGCTCTCCACCGGGAATTGGCATTTGTGCGAAGCCGCGGTCAAAGCCGTTCTTAATGGCGCGCCGATTGAGCAGGCTCCTTTGGACGGCGCCACAAGCCTGCAGCTCAAGGCTTGTAATATTCGCCACGTGGCAAAGAGTGATAAATCGTGCGGCTCTGATACACTTCGCAAGGTGAAGTCTCGCACCACCACGTTCAAGCGCCGAGCCGCAAAGTCCAGAGTCGAGTCAGTTGTGGCTGAGTTGGCTGAAAGCGAGTTAGATGGTCATGGTTCGATGAGTCATGACTCAGGATCCGGGGTGACTCGGATGAGTGAGAACAAAATCGTTGGAGGGGAAGCCGATAGCGGCTCCGTGCAGAGTGTGGGGCCGGCACGAGCCGATGGTGGAGAAATGGAACTTCAATTAACATTGGGGTGGGGTCCACTGAAGAGACAATGA 699 0.5508 MRLSCNGCRVLRRGCTTECPIRISLQWINSPNSQSNATLFLAKFYGRQGLLTLLTNAPSQLQQAVLKSLLYEACGRIVNPVLGSTGLLSTGNWHLCEAAVKAVLNGAPIEQAPLDGATSLQLKACNIRHVAKSDKSCGSDTLRKVKSRTTTFKRRAAKSRVESVVAELAESELDGHGSMSHDSGSGVTRMSENKIVGGEADSGSVQSVGPARADGGEMELQLTLGWGPLKRQ* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0787 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 171 - -
Gso7g0787 232 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Gso7g0787 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 171 - -
Gso7g0787 232 MobiDBLite consensus disorder prediction 197 216 - -
Gso7g0787 232 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0787 Gso-Chr7 8663003 8664650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0787 1 231 AS2 family AT3G02550 44.444 1.29e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso7g0787 LOB 2.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0787 - - gmx:100802646 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0787 7 8663003 8664650 Gso7g0787 7 8663003 8664650 ECH
Gso7g0787 7 8663003 8664650 Gso9g1515 9 39415735 39416329 GST