Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0784 ATGTCATTTCCTAGGCAAACTCAGAAACAAGGAATGGAATGTAAGAGAGGAAAAGAGAAAGCTCCAGCCAAAGAAGAAAACATAAACACATTGAGGAAAATTAAAATTGTGTACACTGACCCTGATGCCACAGATTCTTCCAGTGAAGAAGATGATAAGTTTTTGAGCAATGGTTATCGGTTAAATGGATGTTCTAAGCGGGTTGTCAAGGAAATTTCGCTTCCATGCATGCCAAGCAAATTACATGAAGAGAATTCTTCACAAGAAGATGTCAATAGTGAAAAGATCAAAGCAAGTAGGAGGAACAGGAAACCATCAAGCATGTACAAAGGAGTTCAACGTAGGAAATGGGGGAAATATGTAGCAGAAATAAAAGACCCTATTCGAGGGGTCAGAATGTGGCTTGGTACTTTTGATACTGAAGAAGAGGCTGTTGTGGCATATGAGAGAAAGAGGAATGAGTTTGACAGCTCTTTGTTGGCTTTGAGCAAAAGGGATGCATTGGCTTGTGAAAGTTCCAAAGAAAAAGAAGTATTGTTTCATCCATCTCCGTCATCAGTGCTTGATGTCAGCACTACAAAAGCTCCACTAGATGTTAATGACCTTAATGGCTCAGTCAAAGAAAAGGCAAATGTGGAAACAAATGGTGAAGGAGGAGGCATTGATGTGGAACCAGTTTATAGTGAAGACAATTCAATTTTGCATTTGCTAGAGGAGCCAGTTGTGGCATCATTGGCTGGTCGTGATGATTTCTATTTGGATGAAATAGAGAAAGAGACAATGCTGCTTGGTAATGACTTTTATAATTTCTTGGACAATGACATGAAAGGTGGTTCTGTGTGGAATGTGGAACATGGGGAGGGCACCACCCTTCCCCCTGTAGACAGTGCTTTTGAAGAGTTAGCTTGGATTGATGAAACTCTAAATTGGGAATGTTCCTAA 942 0.4023 MSFPRQTQKQGMECKRGKEKAPAKEENINTLRKIKIVYTDPDATDSSSEEDDKFLSNGYRLNGCSKRVVKEISLPCMPSKLHEENSSQEDVNSEKIKASRRNRKPSSMYKGVQRRKWGKYVAEIKDPIRGVRMWLGTFDTEEEAVVAYERKRNEFDSSLLALSKRDALACESSKEKEVLFHPSPSSVLDVSTTKAPLDVNDLNGSVKEKANVETNGEGGGIDVEPVYSEDNSILHLLEEPVVASLAGRDDFYLDEIEKETMLLGNDFYNFLDNDMKGGSVWNVEHGEGTTLPPVDSAFEELAWIDETLNWECS* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0784 313 MobiDBLite consensus disorder prediction 1 24 - -
Gso7g0784 313 MobiDBLite consensus disorder prediction 83 101 - -
Gso7g0784 313 MobiDBLite consensus disorder prediction 80 111 - -
Gso7g0784 313 ProSiteProfiles AP2/ERF domain profile. 108 165 IPR001471 GO:0003700|GO:0006355
Gso7g0784 313 SMART rav1_2 108 162 IPR001471 GO:0003700|GO:0006355
Gso7g0784 313 Pfam AP2 domain 109 155 IPR001471 GO:0003700|GO:0006355
Gso7g0784 313 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 2 313 - -
Gso7g0784 313 PRINTS Ethylene responsive element binding protein signature 109 120 IPR001471 GO:0003700|GO:0006355
Gso7g0784 313 PRINTS Ethylene responsive element binding protein signature 131 147 IPR001471 GO:0003700|GO:0006355
Gso7g0784 313 SUPERFAMILY DNA-binding domain 107 155 IPR016177 GO:0003677
Gso7g0784 313 CDD AP2 107 150 IPR001471 GO:0003700|GO:0006355
Gso7g0784 313 PANTHER - 2 313 - -
Gso7g0784 313 Gene3D AP2/ERF domain 108 158 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0784 Gso-Chr7 8638618 8640375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0784 31 174 AP2-EREBP Transcription Factor Family AT1G68550 41.333 3.60e-24 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso7g0784 AP2 3.1e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0784 - - gmx:102661579 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0784 7 8638618 8640375 Gso7g0784 7 8638618 8640375 ECH