Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0763 ATGGCGAGTCGCATGAAGGAAGATGAGAAGAACGAGCGCGTGATTCGGGGTCTTCTCAAGCTTCAACATAATCGCAGATGCATTAACTGCAACAGTCTGGGACCACAATATGTGTGCACAAACTTCTGGACGTTTGTTTGCACAAACTGCAGTGGAATACATCGGGAATTCACTCATCGAGTAAAATCAGTTTCAATGGCTAAGTTTACTTCACAAGAAGTTAGTGCACTTCAAGAAGGAGGCAATCAGCGTGCAAAAGAAATTTATTTTAAAGAATGGGATGCCCAACGTCATTCTTTCCCCGATAGCAGTAATGTTGACAGGCTCCGAGACTTTATTAAGCATGTTTATGTGGATAGAAGATTCACTGGAGATAAGACCAATGACAAACCACCAAGAGCCAAGCCGGGTGACAAGGATGATTTTTATCAAGGAGGATCTAGAAGCCCTCCCTATGAGGACACATATGAACGCCGTTATAATGACAGATCTAGTCCAGGTGGAAGAAGTCCTGGATATGATCAAGAAAGTAGGCAATATGGTGATTATAAGAAAAGTCCTGGTCGTCCTCCACTAATTAATGATTGGCGTCGTGAAGATCGCAGAACATCTGATGGAGATTATAAGTTGGAAAGCCAATCTCCTGAGAGAGCCAAAGATGTGGATTCTTCCAGCCCACCTGTGGTCCGACCTGTTAGAGATATTTTGGGAGAAAATGTGGTGCCTCTTCGGATAAGTGAACCACCCAAACCAAACAGTGGAAGACCTGCTGATAGCTCAGCACCGACACAGAGAACTATATCTTCCAGTAGCTTGGCTTCTGGCAATGAAAACCCAGTAGATGTTAAGCTTGAGACTACTAAGAGCCTTATTGATTTTTATGCTGATCCTGAGCCTCCAGTAGCTCCATCAAATCTTCAAGCCCAACAAACTACTGTACCTCAACCTGTTGTGCAGCCAGCAAACTCCAGTAATGACAATTGGGCCTCTTTTGATGTTGCTCCTGCAACAAGTGCAACTCCAAGCTCCTCAAATTTAAATCCACTTGAATCGATGTTGTCCCAATTGTCTGTGCCAGCATCTTTACCTGCTCAAGTTTCTGGAGTCCAAGGACCTATTCCATCATCATCTCTTACTTCTACTTCTGGAGTTGCAAGTGTTAGCGGTTTCTCAGCTTTCCCACCCAGCAATGCTTCTGTACCATCTCCTGGATTGACATCAGTGTCGCCTCTTAATAATGCAGGACAATGGGCCAATTTACAGCAGCAGAAACAACCATTGTTCCCCGCTGCTGTTGGTCAGTCTATTGCACAACAATTTACACCCCTATTAGGTGGAGCAGCAAATAATCAGCCATGGAATGTACCTTCTGCACCCACAGTGCAAGGGCATCCAAGCACACCAATGCCACATACGTACCCTTATGCTTCAAAGCCTGCCAATGAGGCTATATCCAGTGTTGTTTCACAACCTCCGGCTTCAGAAGTTAAAGCAAGTGGAAGGAAAGAACTTCCTGAGGATCTGTTCACTGTAAAATATTCTTCCTTCCCTGCTCCAGTCGTAGGTTGGCAAATGGGTGTTCCCCATGGCATGGGTATCTCAATGCAATACAATAATGTGGTGCCTGTGCCAAGTTTTCCACAGCCATCAAAGTCAATAAATCCATTTGATGTCAGCAGTGAACCTACCGCAAATCAAGCCCCAACTTTTCCTTCCATGTCATCCTTGCAAGGTGCCCTGCCTGGGGTACCACCTCCTGGTGCAGTGCACCCTTCAAGCATGGGTAATCCAACACATGGCTGGACTCCTCTGTCATCATCATTTCTGCCTGCACAGACACAAATGCGTGCAACTGCATTGGGACCAAGGCCATATATGGGGCAACAAATGCCGACTAACATGCCAATGCCAAGGCAAGAAGTTGGGAATTTTGGTAACCAAGGAGCTGTTTTCGGTTTGTCAAATCCAGATCAGCAGCTGACTGGTAGGTTATCAAACACTCCCACCTCTAACTCATTCCCTACAGGAGGGAACCCATTCGGATAA 2046 0.456 MASRMKEDEKNERVIRGLLKLQHNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSVSMAKFTSQEVSALQEGGNQRAKEIYFKEWDAQRHSFPDSSNVDRLRDFIKHVYVDRRFTGDKTNDKPPRAKPGDKDDFYQGGSRSPPYEDTYERRYNDRSSPGGRSPGYDQESRQYGDYKKSPGRPPLINDWRREDRRTSDGDYKLESQSPERAKDVDSSSPPVVRPVRDILGENVVPLRISEPPKPNSGRPADSSAPTQRTISSSSLASGNENPVDVKLETTKSLIDFYADPEPPVAPSNLQAQQTTVPQPVVQPANSSNDNWASFDVAPATSATPSSSNLNPLESMLSQLSVPASLPAQVSGVQGPIPSSSLTSTSGVASVSGFSAFPPSNASVPSPGLTSVSPLNNAGQWANLQQQKQPLFPAAVGQSIAQQFTPLLGGAANNQPWNVPSAPTVQGHPSTPMPHTYPYASKPANEAISSVVSQPPASEVKASGRKELPEDLFTVKYSSFPAPVVGWQMGVPHGMGISMQYNNVVPVPSFPQPSKSINPFDVSSEPTANQAPTFPSMSSLQGALPGVPPPGAVHPSSMGNPTHGWTPLSSSFLPAQTQMRATALGPRPYMGQQMPTNMPMPRQEVGNFGNQGAVFGLSNPDQQLTGRLSNTPTSNSFPTGGNPFG* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0763 681 MobiDBLite consensus disorder prediction 554 604 - -
Gso7g0763 681 MobiDBLite consensus disorder prediction 191 218 - -
Gso7g0763 681 CDD ArfGap_AGFG 12 122 - -
Gso7g0763 681 Pfam Putative GTPase activating protein for Arf 13 124 IPR001164 GO:0005096
Gso7g0763 681 PANTHER ARFGAP/RECO-RELATED 1 681 IPR044820 GO:0005096
Gso7g0763 681 MobiDBLite consensus disorder prediction 554 576 - -
Gso7g0763 681 Gene3D Arf GTPase activating protein 1 132 IPR038508 -
Gso7g0763 681 MobiDBLite consensus disorder prediction 256 280 - -
Gso7g0763 681 MobiDBLite consensus disorder prediction 123 142 - -
Gso7g0763 681 MobiDBLite consensus disorder prediction 303 346 - -
Gso7g0763 681 SUPERFAMILY ArfGap/RecO-like zinc finger 11 124 IPR037278 -
Gso7g0763 681 MobiDBLite consensus disorder prediction 294 346 - -
Gso7g0763 681 MobiDBLite consensus disorder prediction 451 476 - -
Gso7g0763 681 PANTHER ARF GTPASE ACTIVATOR 1 681 - -
Gso7g0763 681 MobiDBLite consensus disorder prediction 123 280 - -
Gso7g0763 681 MobiDBLite consensus disorder prediction 451 467 - -
Gso7g0763 681 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Gso7g0763 681 MobiDBLite consensus disorder prediction 650 681 - -
Gso7g0763 681 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Gso7g0763 681 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Gso7g0763 681 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Gso7g0763 681 SMART arf_gap_3 12 130 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0763 Gso-Chr7 8363048 8371353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0763 12 122 C2H2 Transcription Factor Family AT4G21160 31.452 2.84e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0763 - - gmx:102669541 1343.18