Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0757 ATGGACGACATGGAAGACGACGCAAGGTACCCTCCCAAGTCCTTCTCTCTCAACCGCCAGAACCCCTCCCACCGCCACAAACACCCCATACGCGCCGCCCCCTACCACCGCCCAATGCCCACGCGCTACCAGGAACCCGACGACGATGATGATGACGACAACGAACCCGACGATTTCGACGACGGCGAAGCCGAAAACGGTTACGACGACGATAACAACGTCGCGTATCCTCGGATCCCGAAGAAGCGCAAGGTAGTCGCGGCCGCCGCAGCAGCAGCAGCAGGAGGCTCCTACGAGTTCGCGCCACGCGTCAAATTCTCGTACGGCTCCCGCGGTTCGGGTTCGGGTTCGGGTTCGGGTTCGGGCGAGGAGTGGAACGAGTCCGAGACTTTCGTGCTGTTAGAGGTTTGGGGCGACAAGTTCCTCCAGCTCGGGAGGAACAGTTTGAGATCCGAGGAATGGCACGAGGTTGCAGAAAAAGTTTCCGAGGAATTGAAAACAGAGAGAACGGTGACGCAGTGTAGAAGCGTGTTTGACAAGCTAAAAAGAAGGTACAAGAAGGAGAAAGCTAGAATGGACGAAATGGGCCTTGGTTCCTGCAAATGGACCTTCTTCAAGAAGATGGACATGTTGATGGCTTCCTCCGCAAGACAAGAGTATGGGCTTGCTTGTGGCGTGGATTCTGGGGAGTATGTGTTTATGAACACTAGGGTTTACTTGAACAGTTCCAATGGGTTTGATGAGATGAGGGACAGTCCAGGGGAGTCTGAGAGTGATGATGATGACGATGAAGAGGAGGATGTTGGTGGTGGGGGTGGGGATGAGGATGAGGATGAGGACGACGAGATGTCGTGCCGCGTGTTGGCGGATTCGATTCAGAAGTTTGGGAAGATATATGAAAAGATTGAGAATAGTAAGAGGCAGCAGATGATGGAGCTGGAGAAGATGAGGCTGGATTTTAACAGGGAGCTGGAGCTGCAGAAGAAGCAAATTCTCGAGAGGGCGCAGGCCGAGATTGCCAAAATTCAGGATGTGGATGAGGAGGATACTGACACTTCCGGTGGCGAGAATCTCAGTGAATGA 1083 0.5374 MDDMEDDARYPPKSFSLNRQNPSHRHKHPIRAAPYHRPMPTRYQEPDDDDDDDNEPDDFDDGEAENGYDDDNNVAYPRIPKKRKVVAAAAAAAAGGSYEFAPRVKFSYGSRGSGSGSGSGSGEEWNESETFVLLEVWGDKFLQLGRNSLRSEEWHEVAEKVSEELKTERTVTQCRSVFDKLKRRYKKEKARMDEMGLGSCKWTFFKKMDMLMASSARQEYGLACGVDSGEYVFMNTRVYLNSSNGFDEMRDSPGESESDDDDDEEEDVGGGGGDEDEDEDDEMSCRVLADSIQKFGKIYEKIENSKRQQMMELEKMRLDFNRELELQKKQILERAQAEIAKIQDVDEEDTDTSGGENLSE* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0757 360 Pfam Myb/SANT-like DNA-binding domain 124 210 IPR044822 -
Gso7g0757 360 MobiDBLite consensus disorder prediction 45 68 - -
Gso7g0757 360 MobiDBLite consensus disorder prediction 253 284 - -
Gso7g0757 360 MobiDBLite consensus disorder prediction 244 285 - -
Gso7g0757 360 MobiDBLite consensus disorder prediction 339 360 - -
Gso7g0757 360 Coils Coil 299 341 - -
Gso7g0757 360 PANTHER ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE FAMILY PROTEIN 40 353 - -
Gso7g0757 360 Gene3D - 125 187 - -
Gso7g0757 360 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 40 353 IPR044823 -
Gso7g0757 360 MobiDBLite consensus disorder prediction 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0757 Gso-Chr7 8254431 8258101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0757 286 343 Trihelix Transcription Factor Family AT3G14180 44.828 1.09e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso7g0757 Myb_DNA-bind_4 7.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0757 - - gmx:100778031 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0757 7 8254431 8258101 Gso9g1552 9 39811983 39815491 GST