Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0746 ATGATGGAACACAACATCATCGTCAACAACAACGTGATCGCACCGTTTGTCATAAAAACCTACAATATGGTGAACGATCCCACCACCGATAAACTCATCACGTGGGGCCCAGCCAACAACAGCTTCATCGTCCTCGATCCCCTCGACTTCTCCCACTCCCTCCTCCCTACTTTCTTCAAGCACAACAACTTCTCCAGCTTCGTTCGCCAACTCAACACCTATGGTTTCAGAAAGGTGGATCCGGATCGGTGGGAGTTCGCGAACGAGTGGTTCCTGCGAGGACAAAAGCACTTATTGAGGAACATCGTGCGGAAGAAGCACGGTGGAGCTGGGAGGACCAATTCCAATTCGCATTATTCGCATCCCTTGAAGCTGGAGGAGTTGGACGACGAGGCTATGGTGATGGAGATAGCGAGGTTGAAGGAGGAGCAAAAAGCGTTGGAGGAAGAGCTTCATGAAATGAACAAGAGGTTAGAGACAACAGAAAAACGACCACAACAAATGATGGCTTTTCTGTGTAAGGTTGTCGAGGACCCGCAGATTCTTTCTCGGATTCTCCGAGAAAGAGAAAAGAAACACCTGGGAGAGAAAAAGCGACGCCTCATTCCGCCTCCGCCGCCGACGGCAGCGACGTCGTCGTCGTCGTCCTCCGGCATCAAGACAGAGTTCGAAGAAGACGAAGGTAATTATAATATCAAGTCTTCGTCGCCGGAGACAGGGTTGGAAATCGACAACAATAGTAACAATATTTGTTCGCCGCCGCCGCTGGGGTGTTGGGGTGAACAGGGTTGTTATGGGTACAATTGCGCCTCCGTGCCGGCACCTTTGACGGTGGTAGCGCCGGCGTTTCCGACGATGGGAGGAGGGTATTTGAGGCGTGGGGGGTTTTGGGGGGAAATGGCGGCGGAGGGGAATGCGGTGCCGCCTTATCCGTTTTCGTTGTTGGAAGGGGGCTTTTAG 960 0.524 MMEHNIIVNNNVIAPFVIKTYNMVNDPTTDKLITWGPANNSFIVLDPLDFSHSLLPTFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEWFLRGQKHLLRNIVRKKHGGAGRTNSNSHYSHPLKLEELDDEAMVMEIARLKEEQKALEEELHEMNKRLETTEKRPQQMMAFLCKVVEDPQILSRILREREKKHLGEKKRRLIPPPPPTAATSSSSSSGIKTEFEEDEGNYNIKSSSPETGLEIDNNSNNICSPPPLGCWGEQGCYGYNCASVPAPLTVVAPAFPTMGGGYLRRGGFWGEMAAEGNAVPPYPFSLLEGGF* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0746 319 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 14 312 IPR027725 -
Gso7g0746 319 ProSitePatterns HSF-type DNA-binding domain signature. 55 79 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gso7g0746 319 PRINTS Heat shock factor (HSF) domain signature 16 39 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gso7g0746 319 PRINTS Heat shock factor (HSF) domain signature 54 66 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gso7g0746 319 PRINTS Heat shock factor (HSF) domain signature 67 79 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gso7g0746 319 Coils Coil 125 164 - -
Gso7g0746 319 Pfam HSF-type DNA-binding 16 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gso7g0746 319 PANTHER HEAT STRESS TRANSCRIPTION FACTOR C-1 14 312 - -
Gso7g0746 319 SMART hsfneu3 12 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gso7g0746 319 SUPERFAMILY "Winged helix" DNA-binding domain 13 105 IPR036390 -
Gso7g0746 319 MobiDBLite consensus disorder prediction 192 241 - -
Gso7g0746 319 Gene3D - 8 106 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0746 Gso-Chr7 8114924 8116862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0746 12 202 HSF AT3G24520 62.564 2.57e-83 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Gso7g0746 HSF_DNA-bind 3.6e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0746 K09419 - gmx:100794896 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0746 7 8114924 8116862 Gso9g1565 9 39941644 39943563 GST