Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0726 ATGGATCCTCCACCCAAGACTTGGAGCATCCACACGCGCTCCGAGATAACCGCCAAGTACCAGGTTCTCAGCCGGGTCGGGTCGGGTGTCTACGCCGACGTCTATTGCGCCCGCCGCCTCTCCGACGGCGCCGCGGTGGGGCTCAAGGAGGTTCACGATTCCCAATCCGCCTCGCGCGAAATCGAGGCTCTGAGGCTTCTAAAAGGGTCCCGAAACGTCGTCGTGCTGCACGAGTTCTTCTGGCGCGAGGACGAGGACGCGGTTCTCGTGCTCGAGTTTCTCGGAACCGACCTTGCCACCGTGATCGGAGAAGGTGGTGTCGGTGTTGCAGAGGCTAAGAGGTGGATGGTGCAGGCTCTGAGTGCGGTGGATGAGTGTCATAGGAACATGATCGTGCATAGGGACTTGAAGCCCGCGAATTTCTTGGTTTCTGATGATGGGGTGCTCAAGTTAGCGGATTTTGGACAGGCAAGGATACTAGTGGAGTCTGGATTTGATGCTCCCCAGGAGAACCCGCCACCATATGAAGATGATGCTTCAAATAGTGAAAGCTCACTCCAACATCCTGAAGCTATTTCTCAATTAGTTAACTTAAACCAAACTGTATATGAAAATCCAAATCAGGGAACCGTGAGTCATGAAGAATATTTCAGAGTTTTGGATGAGATGAAAACCAAGAGCTACTCCTATGACACTGATAAGGATACAAACATCTATGATGGAAACACCTCATGTCTTGCAACATGCACAACGAGTGACATAGATGATGATCTTTGCAAGGGTTCTTTTACATATGAAGCTGAGGAGGTGGGAGGAAATGAACTTGGTTGTCTCACATCATGTGTCGGAACTCGGTGGTTCCGAGCTCCTGAGCTACTCTATGGATCTACAGACTATGGTTTAGAGGTTGATCTTTGGTCATTGGGATGTGTCTTTGCTGAGCTATTAACATCGAAGCCATTGTTTCCTGGAACAAGTGATGTAGATCAGCTCAGCAGAATTGTAAGTGTATTGGGAAACATTAATGAGGAAACTTGGCCTGGTTGTTCCAAGATTCCTGATTATGGATCAATCTCATTGGGTAATGTGGAAAATCCAAGTGGTCTTGAAGCATGCATGCCCAATTGCTCCCCTAATGAAGTTTCCCTAGTGCAAAGATTGGTTTGTTATGATCCAGCAAAGAGAACCACAGCTATGGAGTTGCTTCAGGACAAGTACTTTAGTGAAGAACCTCTTCCTGTTCCAATTTCTGAATTGCGGGTTCCTTTGACTAGAAATGGACAAGACCAGGATTCCCCTGGTGGGCACAATGGAATGGGTTCTGATTCTGATTTGGAGGAGTTTGGCACCTTGAATATCACCACAACTGGTTCTGATTTATCTATACAGATCCCTTGA 1398 0.4793 MDPPPKTWSIHTRSEITAKYQVLSRVGSGVYADVYCARRLSDGAAVGLKEVHDSQSASREIEALRLLKGSRNVVVLHEFFWREDEDAVLVLEFLGTDLATVIGEGGVGVAEAKRWMVQALSAVDECHRNMIVHRDLKPANFLVSDDGVLKLADFGQARILVESGFDAPQENPPPYEDDASNSESSLQHPEAISQLVNLNQTVYENPNQGTVSHEEYFRVLDEMKTKSYSYDTDKDTNIYDGNTSCLATCTTSDIDDDLCKGSFTYEAEEVGGNELGCLTSCVGTRWFRAPELLYGSTDYGLEVDLWSLGCVFAELLTSKPLFPGTSDVDQLSRIVSVLGNINEETWPGCSKIPDYGSISLGNVENPSGLEACMPNCSPNEVSLVQRLVCYDPAKRTTAMELLQDKYFSEEPLPVPISELRVPLTRNGQDQDSPGGHNGMGSDSDLEEFGTLNITTTGSDLSIQIP* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0726 465 PANTHER CELL DIVISION PROTEIN KINASE 13 426 - -
Gso7g0726 465 Gene3D Phosphorylase Kinase; domain 1 11 105 - -
Gso7g0726 465 Pfam Protein kinase domain 278 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0726 465 Pfam Protein kinase domain 20 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0726 465 SUPERFAMILY Protein kinase-like (PK-like) 4 420 IPR011009 -
Gso7g0726 465 PANTHER CYCLIN-DEPENDENT KINASE 10 13 426 - -
Gso7g0726 465 MobiDBLite consensus disorder prediction 424 446 - -
Gso7g0726 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Gso7g0726 465 MobiDBLite consensus disorder prediction 165 187 - -
Gso7g0726 465 ProSiteProfiles Protein kinase domain profile. 20 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0726 465 Gene3D Transferase(Phosphotransferase) domain 1 106 414 - -
Gso7g0726 465 SMART serkin_6 20 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0726 Gso-Chr7 7887661 7890643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0726 1 465 Core Cell Cycle Gene Families AT4G28980 58.542 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Gso7g0726 Pkinase 4.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0726 - - gmx:548056 935.636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0726 7 7887661 7890643 Gso9g1584 9 40146503 40148375 GST
Gso5g1956 5 42693102 42694931 Gso7g0726 7 7887661 7890643 PCT
Gso8g0314 8 2968492 2972139 Gso7g0726 7 7887661 7890643 PCT
Gso7g0726 7 7887661 7890643 Gso5g1956 5 42693102 42694931 PCT
Gso7g0726 7 7887661 7890643 Gso8g0314 8 2968492 2972139 PCT