Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0718 ATGAATAGAGGTGTTCTTCAGAGCTCACCAGTGCAACAAATGATGACTGGAAACCCTAACTGGTGGAACATCAATATCAATAGCATGGCTCCACAAGCTCCTCCTTTCTTGTCCACTCCTAACAACTTTCCTATCCCTTGTGCTCCCACTTCTCTTCCCTTTCCTTCTTGGCATGAGAATCAAGATCTTCCAGAGTCATGGAGCCAGCTACTTATGAGTGGAGTGGTGGATGAACAAGGTAAGGCTGGGATGGGTCAGTTTATTCAGACTAAGAAGTTGGAGAGCTGGGAGGATCAAATGCTAGGTCAGGCTCCAAACGCTTCTCTTGTTGATGTTAAACAAGAAAACTTGGTTAACAGCTATGCATATGGGCATGGAAGCGAAGAACTTCAGTCATCAAAGCCATCTTGGTCTCCAAAATCATGTGTGACAACAAGTTTCAGTAGCAACATGTTAGATTTCTCTAACAATAAGACAGATGCAAGGCATCCACCACCAGATCTATCTTCTGAGTGCAACAGCACTGCAGCTGGTGGGGCACTCAAGAAAGCTAGGGTTCAACCCTCTGCTACAACGCAGACTACGTTCAAGGTTAGGAAGGAAAAGCTAGGTGAGAGAATTACGGCCCTTCATCAGCTCGTTTCCCCATTTGGGAAGACTGACACGGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCTCTTAGCTTACCATACTTGAGCGGTGGATCAGGGAACACGAGGCAGCAACATTCTGTTCAAGGAGAGAAGAGATGTATATTCCCTGAAGACCCCGGTCAGCTGCTGGATGAAAACTGCTTGAAGAGGAAAGCAGCTGGAGAGCCGGATACTCAAGAAGAACCAAAGAAGGGGCTGAGGAGTAGAGGGTTGTGTCTGGTGCCAGTGTCATGCACACTGCAAGTTGGAAGTGACAATGGAGCAGATTATTGGGCTCCAGCCCTAGGAGGGGGCTTTCGTTAG 1005 0.4706 MNRGVLQSSPVQQMMTGNPNWWNININSMAPQAPPFLSTPNNFPIPCAPTSLPFPSWHENQDLPESWSQLLMSGVVDEQGKAGMGQFIQTKKLESWEDQMLGQAPNASLVDVKQENLVNSYAYGHGSEELQSSKPSWSPKSCVTTSFSSNMLDFSNNKTDARHPPPDLSSECNSTAAGGALKKARVQPSATTQTTFKVRKEKLGERITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLSGGSGNTRQQHSVQGEKRCIFPEDPGQLLDENCLKRKAAGEPDTQEEPKKGLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0718 334 Gene3D - 190 246 IPR036638 GO:0046983
Gso7g0718 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 187 236 IPR011598 GO:0046983
Gso7g0718 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 197 247 IPR036638 GO:0046983
Gso7g0718 334 CDD bHLH_AtbHLH_like 195 244 IPR045239 -
Gso7g0718 334 PANTHER OS05G0228400 PROTEIN 17 320 - -
Gso7g0718 334 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 17 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0718 Gso-Chr7 7833346 7837721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0718 1 276 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 45.014 2.83e-69 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0718 - - gmx:100786555 686.026