Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0709 ATGCCATCGCGTCCGCCGCCACTCTCTCCTCCTGCCACCGCCGCATCTCATCGGCGCCAAATAATCCTCTGCGGCGCAATTGGCGGCGCGCTCTTTCTAACGGCGCTAATAATCTCCGTCACGATTTTCATCTACCGCAAGCTCTCCTACTCCCGAACGGCGCCGTTCGAGCACAACCAGCGCCGTTTCTCGTACTCCGTTCTCCGCCGCGCCACCAACTCGTTCTCGCCCTCCACAAAGCTCGGCCACGGAGGCTTCGGTTCGGTTCACAAAGCAACCCTCCCTTCCGGCCAGACCGTGGCGCTTAAAGTGATGGACTCGCCCGGTTCGCTTCAGGGAGAGAGAGAGTTCCACAACGAACTAACGCTGTGTTCGAATCTTAAATCTCCATTTGTGATTGCGTTGCTCGGTTTTTCCTCGGACCGGCGTGGAAAAAAGCTTGTTTTGGTTTACGAGCTGATGCCGAACCGGAGTTTACAGGACGCGCTTCTGGACCGAAGGTGTCCGGAGCTGATGAGCTGGGGGAAGAGGTTCGACATCGCGGTTTCGGTGGCGATGGGTTTGGAGTATTTGCATCATGAGTGTGACCCGCCGGTGATTCATGGTGATATTAAGCCGAGCAATGTGTTGCTGGATAGGGATTTTAGGGCGAAGATTGGGGATTTTGGGCTTGCTAGGGTTAAGAATGTGGAGGATCTGGAAATGGTGGATGAGAAGAAGAAAGATGAGGAATTTAGTGTTTTGGAGGGAGAAAGTGTGGTGGATGTTGACCGGTCGCCGGAGAGTTGTCCGGTGAGGGTTGCGGAGTATTCGGATGCTTCGCCGGTGGGGGGTGATAAGTTAAGTGTTGTGTCTGATGGTGGGGGGTGTTTTGAGAGTGTGGATAGTGGGAGTGTGAGTGTGAATGTGAATAAGAAGAAGTGTGGCGGTGGTGGTTCGGGGAGGGATTGGTGGTGGAGGCAGGAGAGTGGGGGAGGAGGGGAATCCGGGAGGGTGAAGGATTATGTGATGGAGTGGATTGGGAGTGAGATAAAGAAGGAGGAACCGAAGAGCGAATGGGTTGATTCGTGTTCGTCGTCGTCTCCAAAGGTGGAGAATGGGAATGAGAATGAGAAGAATAAGAAGAAGAAGGAGAGGAAAAGGTTGGATTGGTGGGCTTCGCTCGATGAGGAGAAGGTGAAGGGAAAGGCGAAGAAGAATAGGAAGCCGAGGGAGTGGTGGAAGGAGGAGTTTTGCGAGGAGTTGTCGAAGAAGAGTAGGAAGAAGAAGAGGGGGTTGGAGTGGTGGCAGAGGGAGGAGGAAGGGGTGGAGCAGAAGAGGAAGAGGAAGAATAAGAGGAGTAGAGGGAGTATTGATTGGTGGTTGGATGGGTTGAGTGGGGAGATAAGGAACAATGGGAGGAGGAATAGCCAGGATTGGGGGGTTAGTGGGGATGTGCAAAAGAGTGGTGGAATTAGCAGCACGCCTAGTATGAGGGGGACCGTGTGTTACATTGCTCCTGAGTATGGTGGTGGAGGGCAATTGTCTGAGAAGTGTGATGTGTACAGTTTTGGGGTTCTGCTTTTGGTTCTGGTGGCCGGGAGGCGGCCGCTGCAGGTGACAGCCTCACCTATTTCGGAGTTTGAGAGGGCCAATTTGATTTCCTGGGCCAGGCAGCTTGCTCACAATGGGAGGCTCTTGGATCTTGTTGACACTTCTATCCATTCCTTGGATAAGGAGCAGGCACTGCTCTGCGTCACTATTGCCTTGTTGTGTTTGCAGAGGTCCCCTGGGAAGAGGCCTTCCATGAAGGAGGTTGTGGGGATGCTTAGTGGGGAAGCTGAGCCGCCACACTTGCCTTTCGAGTTCTCGCCTTCACCGCCATCGAATTTCCCGTTCAAGGCACGAAAGAAGGCTCGGTGA 1902 0.5379 MPSRPPPLSPPATAASHRRQIILCGAIGGALFLTALIISVTIFIYRKLSYSRTAPFEHNQRRFSYSVLRRATNSFSPSTKLGHGGFGSVHKATLPSGQTVALKVMDSPGSLQGEREFHNELTLCSNLKSPFVIALLGFSSDRRGKKLVLVYELMPNRSLQDALLDRRCPELMSWGKRFDIAVSVAMGLEYLHHECDPPVIHGDIKPSNVLLDRDFRAKIGDFGLARVKNVEDLEMVDEKKKDEEFSVLEGESVVDVDRSPESCPVRVAEYSDASPVGGDKLSVVSDGGGCFESVDSGSVSVNVNKKKCGGGGSGRDWWWRQESGGGGESGRVKDYVMEWIGSEIKKEEPKSEWVDSCSSSSPKVENGNENEKNKKKKERKRLDWWASLDEEKVKGKAKKNRKPREWWKEEFCEELSKKSRKKKRGLEWWQREEEGVEQKRKRKNKRSRGSIDWWLDGLSGEIRNNGRRNSQDWGVSGDVQKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGRLLDLVDTSIHSLDKEQALLCVTIALLCLQRSPGKRPSMKEVVGMLSGEAEPPHLPFEFSPSPPSNFPFKARKKAR* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0709 633 PANTHER OS07G0586332 PROTEIN 1 633 IPR044576 -
Gso7g0709 633 MobiDBLite consensus disorder prediction 611 633 - -
Gso7g0709 633 Gene3D Transferase(Phosphotransferase) domain 1 154 247 - -
Gso7g0709 633 Gene3D Transferase(Phosphotransferase) domain 1 462 609 - -
Gso7g0709 633 MobiDBLite consensus disorder prediction 465 485 - -
Gso7g0709 633 ProSitePatterns Protein kinases ATP-binding region signature. 81 103 IPR017441 GO:0005524
Gso7g0709 633 SMART serkin_6 75 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0709 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Gso7g0709 633 SUPERFAMILY Protein kinase-like (PK-like) 49 622 IPR011009 -
Gso7g0709 633 ProSiteProfiles Protein kinase domain profile. 75 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0709 633 MobiDBLite consensus disorder prediction 351 378 - -
Gso7g0709 633 Gene3D Phosphorylase Kinase; domain 1 40 153 - -
Gso7g0709 633 MobiDBLite consensus disorder prediction 309 331 - -
Gso7g0709 633 Pfam Protein kinase domain 471 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0709 633 Pfam Protein kinase domain 78 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0709 633 PANTHER OS07G0586332 PROTEIN 1 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0709 Gso-Chr7 7689488 7691925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0709 481 603 Receptor kinase-like Gene Family AT3G58690 37.209 2.85e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Gso7g0709 Pkinase 3.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0709 - - gmx:100814933 1134.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0709 7 7689488 7691925 Gso7g0709 7 7689488 7691925 ECH