Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0696 ATGTGGAGTACTTTGATTTGCATATATGTCACGAGCACCTCAGAGATCATCACTAGCGTCTCCAGCGACAGCCTCGTAATTCAAGATGTTCTTAGTGAAAAGTATGCATTTTACTTCCTGGTGGTGGGGGCTGCTATATGGGCTTCTTCATGGGCAGAGATTTCGTGTTGGATATGGAGCGGGGAGCGGCAATCAACCACGATGAGAATCAAGTATCTAGAGGCTGTATTGAACCAGGACATTCAATTCTTCGACACCGAGGTTCGGACATCCGACATAGTTTTTGTCATCAACACCGATGCTATCATGGTCCAGGATGCCATTAGTGAGAAGTTGGGGAATTTCATTCACTACATGGCCACCTTTGTTTCTGGCTTTGTTGTGGGTTTCACTGCTGTGTGGCAATTGGCTTTGGTGACTCTTGCTGTTGTCCCTATGATAGCTGTGATTGGAGGCATTCACACTGTCACCTTGGCTAAGCTCTCTGGCAAGAGCCAGGAAGCTCTTTCTCAAGCTGGCAACATTGTGGAACAGGGGAGACTTCAGAGTATATTAAAGTTCAATCCTAATTTACCTTTGCCTTTTCTAGAGATGGCTACATCATAG 606 0.4571 MWSTLICIYVTSTSEIITSVSSDSLVIQDVLSEKYAFYFLVVGAAIWASSWAEISCWIWSGERQSTTMRIKYLEAVLNQDIQFFDTEVRTSDIVFVINTDAIMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGGIHTVTLAKLSGKSQEALSQAGNIVEQGRLQSILKFNPNLPLPFLEMATS* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0696 201 Pfam ABC transporter transmembrane region 31 178 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso7g0696 201 SUPERFAMILY ABC transporter transmembrane region 34 177 IPR036640 GO:0005524|GO:0016021
Gso7g0696 201 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 32 180 IPR039421 -
Gso7g0696 201 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 13 178 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso7g0696 201 Gene3D ABC transporter type 1, transmembrane domain 32 184 IPR036640 GO:0005524|GO:0016021
Gso7g0696 201 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 32 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0696 Gso-Chr7 7533259 7540219 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0696 14 178 Calmodulin-binding Proteins AT2G36910 80.838 3.61e-90 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0696 K05658 - gsj:114418514 347.436