Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0690 ATGGACAATTATGGTTCTTCACAACATCCATATGGGTATCCCAACCCTTATTCATACCCTCCTCATGATCCATATGCTCAACCACCATATCCATATCCATATCCATATCCACATCCAACAAACCCTCCTCATAATAACAACTCAAACTACCCATACCCCCCACCTCCTCCACCACCACACTCCTCATCCCCTTATTCTAGCCCCATAAACTATTCCTCATACCCTCCTCCTCCTCCTCCTCCTCCTCCTCCATCTACCTCATCACATGGCTCCTTTGACTATCCTATGCCTCAGCCACCTCACACTTATCCTTACCCTCACCGAGTCCCTCCAGAATGGAGTGTCACAACAGGAGGTGGAGTGTCTCACTCTCACGCTAGTGATAGTTATAACCCTCCTCACTCTGCTGCTTACCCTACTTTGGATGATCTCATGAGCAATGATAGGTTGTCAGATAATAATAACCTCCCAAGTGCACCTCCCTTGACACATTCCCCACCAATTCTATATCTTGATAGGAGGGATGAGTTTTATGGTTATTCTAGCTACTCCTCCTCAAGTTTGGATCAGGGGGATCCTTCTAGGCTCTCAGATAATAATGATGACTCAGTGAATAGTGAGAGTTTGCAGATTGTGCCGGCTCAGCACAAAGGATCTCTGAGGGTTTTGCTCCTCCATGGGAATTTAGATATTTGGGTTCATGGAGCCAAAAACCTTCCAAACATGGACATGTTCCACAAGACGTTGGAGGACATGATTGGTAGATTCCCCGGTACTGTTGCGAGCAACAAGATTGAAGGAACGGTAAGCCGGAAGATTACTAGTGATCCTTATGTGACAATTTCTGTGTCAAATGCTGTAATTGGTAGGACTTTTGTGATTAGCAATAGTGAGAATCCTGTGTGGGAGCAACATTTCTATGTTCCTGTTGCACACCATGCTGCTGAAGTTCATTTTGTTGTGAAGGACAGTGATGTGGTGGGTTCACAGCTCATTGGCGTTGTGGCAATTCCTGTGGAAAAAATATACTCAGGGCAAAAGGTACAAGGGACCTACCCTATCCTGAACAGCAATGGTAAGCCTTGTAAGCCAGGTGCTGTTTTGATGGTATCCATTCAGTACATTCCAATGCATACACTTATCATGTATTACCAAGGAGTTGGAGCTGGTCCTGACTACATTGGGGTTCCTGGCACATATTTTCCATTGAGGAAAGGTGGAACAGTTACTCTATACCAAGATGCTCATGTTCCAGATGGTTGCCTCCCTAATGTTGTGCTTGATAATGGTGTGTATTATGCTCATGGAAAGTGTTGGCTTGACATCTTTGACGCCATAAATCGAGCTAAGCGTTTGATTTACATTACGGGGTGGTCGGTGTGGCACAAAGTTAGGCTGGTAAGGGATCCTGGAAATCCATCAAAGTTCACCCTGGGTGATATTCTGAGGTCTAAGTCATCGGAGGGAGTAAGAGTGCTTCTCCTTATTTGGGATGACCCTACATCAAGAAGCATTCTAGGTTACAAAGTGGATGGTGTGATGGCAACTCATGATGAGGAAACTAGACGATTTTTCAAGCACTCTTCTGTGCACGTGCTGCTTTGTCCTCGCATTGCTGCAAAACGTCATAGCTGGGCAAAACAAAAGGAAGTTGGAACAATATATACACATCATCAGAAAACTGTAATTGTGGATGCTGATGCCGGAAATAACCAAAGAAAAATAGTAGCATTTGTTGGCGGACTTGATTTGTGTGATGGGCGATATGATACTCCCCACCATCCTCTGTTTAGGACGCTGCAGACACTGCATAAGGATGACTATCACAACCCTACTTTCACGGGTAATACTGGTGGTTGTCCACGGGAGCCATGGCATGACTTGCATTCTAAAATTGATGGTCCAGCAGCTTACGACATTTTGAAAAACTTTGAGGAGCGCTGGTTAAGAGCCGCAAAACCAAAAGGGATTCAAAAGTTGAGGAGTTCATATGATGATGCGTTGCTTAAGCTAGACAGAATCGGAGATATTATTAGTTCATCTAATGCTCCTAGTGTCGGTGATGATAATCCTGAGTCATGGCATGTTCAGATATTCCGTTCAATTGATTCAAGTTCTGTCAAGGGGTTTCCAAAGGAGCCAAAAGATGCATCAAGCATGAATCTAGTATGTGGGAAGAATGTGCTGATTGACATGAGCATACATACAGCATATGTAAAGGCCATTCGTGCTGCACAACATTACATTTATATAGAGAATCAATATTTCATTGGGTCTTCATATAATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTAATTCCTATGGAAATTGCGCTGAAGATTGCTGCAAAGATAAGGGCAAATGAGAGATTTGCAGTGTACATTGTTATTCCAATGTGGCCAGAGGGTGTTCCAACTGGTGCTGCCACCCAAAGAATTCTATTTTGGCAGCATAAAACAATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGTTGAAGTTGGGCTTGAAACAGCATTCTCTCCACAAGACTATTTGAACTTTTTTTGTCTTGGCAATAGGGAGGCCATAGATATGTACGAGAATATCACTGTGTCTGGAACTCCTCCGCCAGCAAATAGTCCACAAGCATTTAGTAGAAACAATCGCCGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTCATATTGGGGTCTGCAAACATCAACCAGCGCTCTATGGAAGGAACAAGGGACACCGAGATTGCAATGGGTGCGTACCAACCTCATCATACCTGGGCAAGAAGCCAGTATCATCCTCGTGGGCAAATCCATGGATATAGGATGTCACTTTGGGCTGAACATACGGGTACGATTGAAGACTGCTTCTTACAACCAGAGAGCCTTGAATGTGTTAGTAGGATTAGAACAATGGGTGAGCTGAACTGGAAGCAATTTGCATCAAATGATGTAACAGAAATGACAGGGCATCTGCTCAAGTACCCGGTAGAAGTCGATCGAAAGGGTAAGGTAAGATCCCTCCCGGGCCACGAAGAGTTTCCGGATGTGGGAGGAAAGATTGTAGGATCATTCATTGCCATTCAGGAGAATCTAACCATTTGA 3129 0.4372 MDNYGSSQHPYGYPNPYSYPPHDPYAQPPYPYPYPYPHPTNPPHNNNSNYPYPPPPPPPHSSSPYSSPINYSSYPPPPPPPPPPSTSSHGSFDYPMPQPPHTYPYPHRVPPEWSVTTGGGVSHSHASDSYNPPHSAAYPTLDDLMSNDRLSDNNNLPSAPPLTHSPPILYLDRRDEFYGYSSYSSSSLDQGDPSRLSDNNDDSVNSESLQIVPAQHKGSLRVLLLHGNLDIWVHGAKNLPNMDMFHKTLEDMIGRFPGTVASNKIEGTVSRKITSDPYVTISVSNAVIGRTFVISNSENPVWEQHFYVPVAHHAAEVHFVVKDSDVVGSQLIGVVAIPVEKIYSGQKVQGTYPILNSNGKPCKPGAVLMVSIQYIPMHTLIMYYQGVGAGPDYIGVPGTYFPLRKGGTVTLYQDAHVPDGCLPNVVLDNGVYYAHGKCWLDIFDAINRAKRLIYITGWSVWHKVRLVRDPGNPSKFTLGDILRSKSSEGVRVLLLIWDDPTSRSILGYKVDGVMATHDEETRRFFKHSSVHVLLCPRIAAKRHSWAKQKEVGTIYTHHQKTVIVDADAGNNQRKIVAFVGGLDLCDGRYDTPHHPLFRTLQTLHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDILKNFEERWLRAAKPKGIQKLRSSYDDALLKLDRIGDIISSSNAPSVGDDNPESWHVQIFRSIDSSSVKGFPKEPKDASSMNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAAKIRANERFAVYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLETAFSPQDYLNFFCLGNREAIDMYENITVSGTPPPANSPQAFSRNNRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPHHTWARSQYHPRGQIHGYRMSLWAEHTGTIEDCFLQPESLECVSRIRTMGELNWKQFASNDVTEMTGHLLKYPVEVDRKGKVRSLPGHEEFPDVGGKIVGSFIAIQENLTI* 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0690 1042 MobiDBLite consensus disorder prediction 14 88 - -
Gso7g0690 1042 CDD C2_plant_PLD 222 375 - -
Gso7g0690 1042 Gene3D C2 domain 222 362 IPR035892 -
Gso7g0690 1042 Pfam Phospholipase D Active site motif 889 915 IPR001736 GO:0003824
Gso7g0690 1042 Pfam Phospholipase D Active site motif 554 588 IPR001736 GO:0003824
Gso7g0690 1042 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 888 915 IPR001736 GO:0003824
Gso7g0690 1042 PANTHER PHOSPHOLIPASE D 129 1042 IPR015679 -
Gso7g0690 1042 MobiDBLite consensus disorder prediction 117 134 - -
Gso7g0690 1042 Pfam C2 domain 227 354 IPR000008 -
Gso7g0690 1042 Gene3D Endonuclease Chain A 699 942 - -
Gso7g0690 1042 ProSiteProfiles C2 domain profile. 212 352 IPR000008 -
Gso7g0690 1042 PANTHER PHOSPHOLIPASE D ALPHA 1 129 1042 - -
Gso7g0690 1042 Gene3D Endonuclease Chain A 431 669 - -
Gso7g0690 1042 MobiDBLite consensus disorder prediction 182 205 - -
Gso7g0690 1042 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 553 588 IPR001736 GO:0003824
Gso7g0690 1042 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 225 376 IPR035892 -
Gso7g0690 1042 SMART pld_4 553 588 IPR001736 GO:0003824
Gso7g0690 1042 SMART pld_4 888 915 IPR001736 GO:0003824
Gso7g0690 1042 SUPERFAMILY Phospholipase D/nuclease 717 974 - -
Gso7g0690 1042 MobiDBLite consensus disorder prediction 1 167 - -
Gso7g0690 1042 Pfam Phospholipase D C terminal 962 1032 IPR024632 -
Gso7g0690 1042 SUPERFAMILY Phospholipase D/nuclease 423 652 - -
Gso7g0690 1042 SMART C2_3c 228 351 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0690 Gso-Chr7 7428750 7435876 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0690 60 1042 Phospholipase D Gene Family (Wang group) AT2G42010 67.901 0.0 1431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0690 K01115 - gmx:100805294 1954.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0690 7 7428750 7435876 Gso7g0690 7 7428750 7435876 ECH