Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0689 ATGGCTGATGAAGCTTCTGGAGATGTTGATCTAAGGTTGGGAGAGCCCAAGGCGCCTAAAGAGGAGCCCGAGACGGAGGAGGGGTCTGCCATACGTGTGATGCCGGTGGCGGTTCACGTGCCGGCAGGGATGTCCATGTCCATGTCCAAGGCTCTGGCCCAAGCCCAAGCTCAGGCCCAAGCCCAAGCCCAACCACAAAAACGGGCCTCCACCAAAGACCGTCATACCAAAGTAGAGGGCCGAGGTAGGAGGATCCGAATGCCCGCCACGTGTGCGGCACGGATCTTCCAGCTGACCCGAGAACTTGGTCATAAATCCGACGGCGAAACCATCCGGTGGCTTCTCGAACACGCCGAACCTGCCATCATCGCCGCCACCGGCACCGGTACCGTCCCCGCCATCGCGATGTCCGTCAACGGAACCCTAAAGATTCCAACCACTTCACCTTCCGACCAAGAACCCGGAGACCAGCCCGAGAGGAAGAAGCGCAAACGACCCGCGAATAGCGCCTACGTTGACATAAACGACGCCGCCGTTTCGATCTCCACCGGGCTCGCAAGCTCTAATAATAATAACCAAAACGCAGCAACGACGACGACGATGACAATTCCGCAACATACAGCAATTCCTTTGCCGCAAGGAATGGTTCCCGTGTGGGCCATACCTTCAAACGCCGTCGTTCCGGCAGCAGGCGCGTTTTTTGTGGTTCCTCAAACGGCGTCGTTTCAGCATCAGCCTCAGTTCTTCACCATAGCGAGACCTATATCCGCGTTTGTCTCTTCCCTGGTCACACCCGTTCAGCCTCAGCCAACCTCGATAACGTCTTCAAGCAACGCTAACGCTTCCTCCACCGCGCCGTCGTCGAAGTCGGCGGCGAGAGCCACCGTCATGGCTCCGACCACTACCACCGCCACCACCACTACCACGCAGATGCTGAGGGATTTCTCGTTGGAGATTTACGACAAGCAGGAGTTGCAGTTCATGTCGCGCGCGTCTTCCAAGCATTGA 1008 0.5774 MADEASGDVDLRLGEPKAPKEEPETEEGSAIRVMPVAVHVPAGMSMSMSKALAQAQAQAQAQAQPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSPSDQEPGDQPERKKRKRPANSAYVDINDAAVSISTGLASSNNNNQNAATTTTMTIPQHTAIPLPQGMVPVWAIPSNAVVPAAGAFFVVPQTASFQHQPQFFTIARPISAFVSSLVTPVQPQPTSITSSSNANASSTAPSSKSAARATVMAPTTTTATTTTTQMLRDFSLEIYDKQELQFMSRASSKH* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0689 335 PANTHER TRANSCRIPTION FACTOR TCP9 17 335 - -
Gso7g0689 335 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 335 IPR005333 GO:0003700
Gso7g0689 335 MobiDBLite consensus disorder prediction 1 30 - -
Gso7g0689 335 ProSiteProfiles TCP domain profile. 71 125 IPR017887 -
Gso7g0689 335 MobiDBLite consensus disorder prediction 49 67 - -
Gso7g0689 335 Pfam TCP family transcription factor 70 169 IPR017887 -
Gso7g0689 335 MobiDBLite consensus disorder prediction 269 307 - -
Gso7g0689 335 MobiDBLite consensus disorder prediction 142 168 - -
Gso7g0689 335 MobiDBLite consensus disorder prediction 49 81 - -
Gso7g0689 335 MobiDBLite consensus disorder prediction 154 168 - -
Gso7g0689 335 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0689 Gso-Chr7 7416407 7417964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0689 65 334 TCP Transcription Factor Family AT2G45680 57.534 1.51e-95 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gso7g0689 TCP 2.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0689 - - gmx:100804760 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0689 7 7416407 7417964 Gso7g0689 7 7416407 7417964 ECH
Gso7g0689 7 7416407 7417964 Gso3g0152 3 1863063 1864641 GST