Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0683 ATGTTAAATTTCCTTTCCTACTCTCACTCAACAATTTTTCCCCCAGATACTTTCGTTGTGTTATATACTCTCTCTGAGATGGATTCTGACAATTTCCAGTCAGTTGATTTGAGGAAGTACATATGTCCAGTACCGGGTATCCAAGTTTTGGTGGTAGATAACAACTTGACATGCCTAGCAACTGTATTGAAAATTCTTCAAACCCTTGGATATGAAGTTGTGACTGCTTCATTAGCTTCTGAAGCATTAGCGATTATTGAGAAGAAGAAAGATGAACTTAACCTTGCACTTTTGGAGGTTGACTTACCAGACATGAAAATAAATTCCCTGACAGAGAAAATAAGAGAAATCTCTGACCTTCAGTATTTTCTTATGACTGCTAATGATAATCCATTGTGCAATGGATCTAAGAGGTATTTTAAAAAGCCAGTCACCATTTATGATCTAAGCAGCCTGTGGATGTATTTGAAGTGGAAAATAGAAGATGGAAGCATAGTTACTGAAGATGTAAGAAGCTATGTAAACAACAATCAAGAATTCCAACCATTCCTGAACGCCAGAGGGCAGACTCTCCAAATTGGGAAAAGAAAAGAACAAAGACATAAGATAGGGGGAAATCAAAGTGAATCATTATTGCTGAAAAGGAAAAGGCTTAGCTGGACTGGTGACTCACATACGAAGTTCTTGGGAGGTGTTGAATTTTCAGGAACCAGTGGAGAAGCTCCTCCAAATCAAAGACACCAGCTTAGAAATGTGCCAGGACTTGCAAAACAGAATGTTAAAAACCATTTGCAGCAATCTCTGCAACAAGCTAATCCAATTCATCAGCACAGCAATATACATTCATCTGATTTGAATTTGGGATCGCAGTATGTTTCTCAGACTGACAATTATAACGGTAAAATACACCAATTGCCCAATTGTCACGTTAAGATCTGTAATTGCATGCATCTGCATTCTCAACGCAACCCATTATATGAATTATCAATTTTAAGTCCAAGTGATCAGACATCAACTGGGCAAAATCAATTGTATCCACCGGGGGAACTGTTCGGTGCTGCACACTACACATCCGGGTCTGGTGAATTTATGAACAATGGTAATGGTAAGTCGGGGGAGACATGTGCTGAAAATACTACTGATATAAAAGTTTTCAGTGAGGACACACATGTATACTGTGTGGATGATCTTGCTGTGCAAAGTGAAATGGATTTTTCAACTCTGTTAGCCAATGACATGTGCCAACGATTTCACCCATTCCTTCCCGTTCCTCTTCCACCATCAGATGGAAAAGAACATGGCATTTCTGGGGCTGAAGCAGGACAGATTGATGAAATTTTTTATCCTCCAAATGGAACTCAGCAGTTTAGTGATGAGGATTTAAATATCTGGTTATCAATGGTTAAATCCCTGAATTGCTCAATGGTGTTGCTTGAAGCTGTGGAAGGCTGA 1452 0.3912 MLNFLSYSHSTIFPPDTFVVLYTLSEMDSDNFQSVDLRKYICPVPGIQVLVVDNNLTCLATVLKILQTLGYEVVTASLASEALAIIEKKKDELNLALLEVDLPDMKINSLTEKIREISDLQYFLMTANDNPLCNGSKRYFKKPVTIYDLSSLWMYLKWKIEDGSIVTEDVRSYVNNNQEFQPFLNARGQTLQIGKRKEQRHKIGGNQSESLLLKRKRLSWTGDSHTKFLGGVEFSGTSGEAPPNQRHQLRNVPGLAKQNVKNHLQQSLQQANPIHQHSNIHSSDLNLGSQYVSQTDNYNGKIHQLPNCHVKICNCMHLHSQRNPLYELSILSPSDQTSTGQNQLYPPGELFGAAHYTSGSGEFMNNGNGKSGETCAENTTDIKVFSEDTHVYCVDDLAVQSEMDFSTLLANDMCQRFHPFLPVPLPPSDGKEHGISGAEAGQIDEIFYPPNGTQQFSDEDLNIWLSMVKSLNCSMVLLEAVEG* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0683 483 PANTHER TWO-COMPONENT RESPONSE REGULATOR 16 483 IPR045279 GO:0009736
Gso7g0683 483 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 216 266 IPR006447 GO:0003677
Gso7g0683 483 CDD REC_typeB_ARR-like 49 156 - -
Gso7g0683 483 Gene3D - 47 161 - -
Gso7g0683 483 ProSiteProfiles Response regulatory domain profile. 48 157 IPR001789 GO:0000160
Gso7g0683 483 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR16 16 483 - -
Gso7g0683 483 SUPERFAMILY CheY-like 45 156 IPR011006 -
Gso7g0683 483 Gene3D - 214 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0683 Gso-Chr7 7329960 7341885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0683 46 272 Response Regulator Gene Family AT4G31920 26.800 1.06e-19 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso7g0683 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0683 - - gmx:100801594 980.319