Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0681 ATGGGTATTGATACCAATTTGGTGACTACTGTTATTGGGTTTGGTTTGAGTGCAACTTTCATTGTTTTTGTTTGCGCAAGAATAATTTGTGGAAGACTACGAGAGCGATCACGGACTATATATGAAATTGAACCAATAACAGATATAGAACGGGCAGAATATCATGGTCATGACCCTGCACCTGGTTTTGTAGCTGCTATCCCCACTTTGAATTTCAACCATGAAGCCTTCAGTTCAATTGAAACTACACAGTTGAGTCTAGTTTCCGGTCTCTACTCTCTAATTCGTAGGTGTGTGATATGTTTGGCAGAGTACAAAGAAAAAGAACTATTGCGCATCATACCAAAATGTGGCCACACATTTCATCTTTCTTGCATTGATATGTGGCTGAGAAAACAGTCCACATGTCCAGTGTGCCGTTTGTCACTGCAGAATGCTTTTGAATCAAAACATGCGAGGCATGTAACATTTACCATCAGGCATTCTCTTGATGAGCCCAATGCCCCAGAAAGGAACACAGATAGTGATCAGAGGCAAGTTGAACTTAATTCTAGTAACAACTCTCAACAATCAACTTTGGGAGAAGCAGAAGCTAGACAGTAA 603 0.4046 MGIDTNLVTTVIGFGLSATFIVFVCARIICGRLRERSRTIYEIEPITDIERAEYHGHDPAPGFVAAIPTLNFNHEAFSSIETTQLSLVSGLYSLIRRCVICLAEYKEKELLRIIPKCGHTFHLSCIDMWLRKQSTCPVCRLSLQNAFESKHARHVTFTIRHSLDEPNAPERNTDSDQRQVELNSSNNSQQSTLGEAEARQ* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0681 200 PANTHER OS11G0150450 PROTEIN 2 188 - -
Gso7g0681 200 MobiDBLite consensus disorder prediction 178 200 - -
Gso7g0681 200 MobiDBLite consensus disorder prediction 162 200 - -
Gso7g0681 200 CDD RING-H2_EL5_like 97 140 - -
Gso7g0681 200 SMART ring_2 98 139 IPR001841 -
Gso7g0681 200 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 149 IPR013083 -
Gso7g0681 200 MobiDBLite consensus disorder prediction 162 177 - -
Gso7g0681 200 Pfam Ring finger domain 97 140 IPR001841 -
Gso7g0681 200 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
Gso7g0681 200 SUPERFAMILY RING/U-box 80 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0681 Gso-Chr7 7318673 7320743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0681 97 178 C3H Transcription Factor Family AT4G10160 41.463 1.05e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0681 - - gmx:100800505 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0681 7 7318673 7320743 Gso7g0681 7 7318673 7320743 ECH