Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso7g0679 | ATGGCTGGAGCTGAAGCTACAAAATATGCTTCTTCTGCTACAAGTCCAACAACCACTGCGGCAAACAACATGGCCACCAAATCGAACAAACCAACCATCAGAAGGTTCATTGGGGTGAGGCAAAGACCCTCAGGAAGGTGGGTGGCTGAGATCAAAGACTCTTCTCAGCACGTGAGATTATGGCTTGGAACCTATGATACTCCAGAAGAGGCCGCAAGGGCTTATGATGAAGCAGCACGAGCTCTGAGAGGTGAAAATGCTAGAACCAACTTTGCACCAGTGAGCCAAGTCATACTGGGTCAACAACAATCAGGCTCTAATAATAACCTTTCAACTGGGTCTGATATTGGGAAGCATGGTTTGAGCTTTGCTTCCTTGAAGGCCAAGTTGAGCAAGAATCTTCAGAACATTATGGCTAGGGCAAGTGATCACAATAACAACAACAAGTCCTCAAAGAGTAGGGTGAGTGACCACTTCACCTTTGCCAGCATCTTCCACCGTAGGAGCTACCAAATCCCTGAAGGGGACACGATGAAGAACATTGACAAAGTGGTGCAGCCTAGTATTATTGTGCCTCCTATGGAAGCTGGTGGTGTTGGTGACTATAATTCTTCTGTTGCTAATTGGGAAAGTGCTTCTAGTGTCTCTGATTGCAGCTCTGAATGGGTAGGATTCGGGAATTCGAAACTCGGGTTGGAGTCGGACGGGTATGAGATAGGGGAGGCTAGTGTTGGTGATCAAGGGTTCTTGGAGCAGTTAATGGGGTGGATTGAAACCCCTGATATTAGTGATCATCAAGGTGAGGGTTCAAGGAGTAAGAGGTTCAAGGTGTCTTCTTCTGTGCTTGTGCCACCTACTTTCACTGGCTCTTCTTATGATTGTGGATCCCCTTTTAGTGGTTATGCCTCTCCTTATAATAACGGTTATGCTTCTCCATATAACAACGGTTGTGCCTCCCCTTGTAATGGTTATGCTTCTCCGTATTACAATAATAAGAAGTGA | 1002 | 0.4601 | MAGAEATKYASSATSPTTTAANNMATKSNKPTIRRFIGVRQRPSGRWVAEIKDSSQHVRLWLGTYDTPEEAARAYDEAARALRGENARTNFAPVSQVILGQQQSGSNNNLSTGSDIGKHGLSFASLKAKLSKNLQNIMARASDHNNNNKSSKSRVSDHFTFASIFHRRSYQIPEGDTMKNIDKVVQPSIIVPPMEAGGVGDYNSSVANWESASSVSDCSSEWVGFGNSKLGLESDGYEIGEASVGDQGFLEQLMGWIETPDISDHQGEGSRSKRFKVSSSVLVPPTFTGSSYDCGSPFSGYASPYNNGYASPYNNGCASPCNGYASPYYNNKK* | 334 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso7g0679 | 333 | MobiDBLite | consensus disorder prediction | 8 | 29 | - | - | |
Gso7g0679 | 333 | SUPERFAMILY | DNA-binding domain | 36 | 92 | IPR016177 | GO:0003677 | |
Gso7g0679 | 333 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 1 | 271 | - | - | |
Gso7g0679 | 333 | Gene3D | AP2/ERF domain | 34 | 93 | IPR036955 | GO:0003700|GO:0006355 | |
Gso7g0679 | 333 | SMART | rav1_2 | 35 | 98 | IPR001471 | GO:0003700|GO:0006355 | |
Gso7g0679 | 333 | ProSiteProfiles | AP2/ERF domain profile. | 35 | 92 | IPR001471 | GO:0003700|GO:0006355 | |
Gso7g0679 | 333 | PRINTS | Ethylene responsive element binding protein signature | 36 | 47 | IPR001471 | GO:0003700|GO:0006355 | |
Gso7g0679 | 333 | PRINTS | Ethylene responsive element binding protein signature | 58 | 74 | IPR001471 | GO:0003700|GO:0006355 | |
Gso7g0679 | 333 | Pfam | AP2 domain | 35 | 84 | IPR001471 | GO:0003700|GO:0006355 | |
Gso7g0679 | 333 | Coils | Coil | 127 | 147 | - | - | |
Gso7g0679 | 333 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Gso7g0679 | 333 | CDD | AP2 | 35 | 94 | IPR001471 | GO:0003700|GO:0006355 | |
Gso7g0679 | 333 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 1 | 271 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso7g0679 | Gso-Chr7 | 7295001 | 7296604 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso7g0679 | 35 | 92 | AP2-EREBP Transcription Factor Family | AT5G19790 | 74.138 | 8.61e-26 | 102 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Gso7g0679 | AP2 | 1.2e-15 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso7g0679 | K09286 | - | gmx:100799444 | 627.476 |