Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0677 ATGGTGGAAGCAACTCAAGCTAATAAAGATAAAGATGCGGCTGCATTTGAAGCCCGTTCCACAGAAGACTGGTTGTTGCATGCACAGGAACTTGTTCCTGTTGCTCTTGCTAATGCAAGGGAGGTTAAGGGGTTTCCTGGTAGGTGGAAGATGATCATTTCAAAATTGGAGCAGATTCCATTACGTTTATCGGACTTGTCGAGCCACCCTTGTTTCTCCAGGAATGCTCTTTGCAAGGAGCAATTGCAGGCTGTGTCAAAGACACTTAGAGAAGCCATTGAATTGGCTGACTTGTGTGTGAAGGAGAAGTACGAGGGAAAGCTTCGGATGCAGAGTGATCTTGATGCATTGATTGGGAAACTGGATTTGAATTTGAAGGATTGTGGTCTCTTGATCAAGACGGGGGTGCTTGGTGAAGCTAGTTTGCCATTAACCGTGTTAGGTTCTATGGCAGAATCAGATATTGCAACACACAACAATATAAGAGAACTACTTGCACGCCTTCAGATTGGTCACTTGGAAGCAAAGCACAAAGCCTTAGACAGACTCTATGATGTTATGAAAGAGGATGAGAAGAATGTTTTGGCTATTTTTGGTAGGAGCAATGTTGCTGCTTTGGTTCAATTGCTCACAGCAACATCTCCACGGATAAGGGAGAAGACAGTTAGTGTTATATGCTCTCTCGTGGAGTCGGGAAGCTGTGAAAAGTGGCTAGTTTCTGAAGGAGTTCTGCCACCTCTTATAAGGCTTGTTGAATCTGGTAGTGCTGTGGGTAAAGAGAAGGCTACTGTATCTCTTCAGAGATTGTCAATGTCAGCAGAAACAACGCGTGCAATTGTTGGACACGGTGGTGTTCAGCCATTGATTGAGCTTTGTCAAAATGGTGATTCTGTGTCACAGGCTGCTGCTGCCTGTACTTTGACAAATGTATCAGCTGTTCCTGAGGTGAGACAGGCTTTGGCTGAAGAAGGAATTGTGAGGGTTATGATTAATCTTCTTAATTATGGAATTTTATTAGGTTCCAAAGAGTATGCAGCAGAATGCTTGCAGAATCTCACTTCAAGCAATGAGCATCTGAGGAAGTCTGTTATATCAGAAGGTGGTGTTAGGAGTCTTCTGGCTTATCTTGATGGTCCACTTCCCCAAGAATCCGCAGTTGGAGCTTTGAAAAATCTGGTTGGATCAGTTTCCGAGGAAACTTTAGTTTCTCTTGGTTTGGTTCCCTGTTTGGTTCACGTGCTGAAGTCTGGATCGTTGGGTGCTCAACAAGCTTCTGGGTCTATCATCTGCCGTGTTTGCAGTTCAATGGAGATGAAGAAAATAGTTGGTGAAGCTGGGTGCATCCCTCTTCTTATAAAGATGCTTGACGCTAAATCAAATACTGCTAGAGAGGTTGCTGCTCAAGCGATTTCAAGCCTAATGGTTCTGTCCCAGAATCGGAGAGAGGTTAAGAAGGATGATAAAAGTGTGCCAAATCTGGTCCAGTTGCTGGATCCAAGTCCTCAAAACACTGCAAAAAAGTATGCAGTTTCTTGCCTTGGATCACTTTCTCCGAGTAAGAAATGTAAGAAACTGATGATTTCTTATGGAGCAATCGGGTATCTGAAGAAGCTTACAGAGATGGACATTGTAGGAGCTAAAAAGTTACTTCAGCGGTTGGAAAGAGGGAAATTGAGAAGCTTGTTCAGCAGAAAGTAG 1698 0.4364 MVEATQANKDKDAAAFEARSTEDWLLHAQELVPVALANAREVKGFPGRWKMIISKLEQIPLRLSDLSSHPCFSRNALCKEQLQAVSKTLREAIELADLCVKEKYEGKLRMQSDLDALIGKLDLNLKDCGLLIKTGVLGEASLPLTVLGSMAESDIATHNNIRELLARLQIGHLEAKHKALDRLYDVMKEDEKNVLAIFGRSNVAALVQLLTATSPRIREKTVSVICSLVESGSCEKWLVSEGVLPPLIRLVESGSAVGKEKATVSLQRLSMSAETTRAIVGHGGVQPLIELCQNGDSVSQAAAACTLTNVSAVPEVRQALAEEGIVRVMINLLNYGILLGSKEYAAECLQNLTSSNEHLRKSVISEGGVRSLLAYLDGPLPQESAVGALKNLVGSVSEETLVSLGLVPCLVHVLKSGSLGAQQASGSIICRVCSSMEMKKIVGEAGCIPLLIKMLDAKSNTAREVAAQAISSLMVLSQNRREVKKDDKSVPNLVQLLDPSPQNTAKKYAVSCLGSLSPSKKCKKLMISYGAIGYLKKLTEMDIVGAKKLLQRLERGKLRSLFSRK* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0677 565 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 242 284 IPR000225 GO:0005515
Gso7g0677 565 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 565 - -
Gso7g0677 565 Gene3D - 153 395 IPR011989 -
Gso7g0677 565 SMART arm_5 476 518 IPR000225 GO:0005515
Gso7g0677 565 SMART arm_5 313 354 IPR000225 GO:0005515
Gso7g0677 565 SMART arm_5 435 475 IPR000225 GO:0005515
Gso7g0677 565 SMART arm_5 190 230 IPR000225 GO:0005515
Gso7g0677 565 SMART arm_5 356 394 IPR000225 GO:0005515
Gso7g0677 565 SMART arm_5 272 312 IPR000225 GO:0005515
Gso7g0677 565 Gene3D - 396 544 IPR011989 -
Gso7g0677 565 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 2 565 - -
Gso7g0677 565 SUPERFAMILY ARM repeat 161 540 IPR016024 -
Gso7g0677 565 Pfam Armadillo/beta-catenin-like repeat 274 312 IPR000225 GO:0005515
Gso7g0677 565 Pfam Armadillo/beta-catenin-like repeat 437 473 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0677 Gso-Chr7 7276304 7279737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0677 211 484 U-box Gene Family AT3G54790 26.882 1.96e-17 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0677 - - gmx:100798922 1066.99