Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0668 ATGAGTTTTGGGGGTCTTTTAGACAACAAATCAGGTAGTGGCGGTGCCAGAAACAACGTTTCAGATATTCCTTACAACAACAACAACGTTACCAATACCACCACCACCAACAACGATAGAATGCCCTTTGGTGCAATCTCTCAGCCACGCCTCGTGACCACCACTCCCACTTTGGCCAAATCCATGTTCAACTCATCAGGGCTATCTCTGGCACTTCAAACCAATATAGATGGACAAGAAGATGTGAATAGAATGGCCGAGAATACCTCCGAACCGAACGGTTTGAGAAGAAGCCGAGAAGATGAACATGAAAGCAGATCTGGCAGTGACAACATGGACGGCGCTTCCGGCGACGAACACGACGCCGCCGACAACCCTCCGAGGAAAAAACGCTATCACCGACACACCCCTCAGCAGATACAAGAACTTGAAGCGTTGTTCAAGGAGTGTCCTCATCCAGATGAAAAGCAAAGGCTTGAACTGAGTAGAAGGCTGTGTTTGGAAACTCGTCAAGTGAAGTTTTGGTTCCAAAATCGTCGAACCCAAATGAAGACCCAGTTGGAGCGACACGAGAATACGTTGCTGAGGCAAGAGAACGACAAGCTTCGAGCGGAGAACATGTCCATAAGGGACGCAATGAGGAATCCCATGTGCTCCAATTGCGGTGGCCCAGCCATCATCGGCGAGATTTCTCTGGAAGAGCAGCACCTCCGCATCGAGAACGCGCGCCTCAAGGATGAACTCGACCGCGTGTGTGTACTCGCGGGCAAGTTCTTGGGGCGCCCCGTTTCCTCATTACCGAGTTCCAGTTTGGAGCTCGGCATGAGAGGAAACGGGTTCGCAGGAATACCTGCGGCAACAACGTTGCCGCTGGGACAGGATTTTGACATGGTTATGTCTGTGTCAATGAATAATAATGCGTTGGCTATGGTGTCTCCACCGACGAGTGCTAGGGCGGCCGCGGCCGGATTCGATAGGTCGGTGGAGAGGTCGATGTTTCTTGAGCTTGCCTTGGCTGCTATGGATGAGTTGGTGAAGATAGCGCAGACTGGGGAGCCTCTTTGGATGAGGAATGCTGAAGGAGGGAGGGAAATTTTGAACAATGAGGAGTACGTGAGGACCTTCACTCCTTGCATTGGTTTAAGACCCAATGGGTTTGTGTCTGAGGCCTCTAGGGAAAATGGAATGGTCATCATTAACAGCTTGGCACTTGTTGAGACTCTTATGGACTCGAATCGATGGGCAGAGATGTTTCCTTGTATCATTGCAAGAACCTCCACCACGGAAGTGATATCTAGTGGAATAAACGGAACAAGAAATGGGGCACTTCAATTAATGCATGCTGAACTTCAAGTTCTTTCCCCTTTGGTGCCGGTTCGTGAGGTGAATTTCCTGCGGTTTTGCAAGCAACACGCAGAAGGGGTGTGGGCTGTGGTGGATGTGTCCATAGATAGCATCCGAGAAAGTTCGGGAGCACCCACTTTTGTGAACTGTAGGAGGCTTCCTTCTGGTTGCGTGGTGCAAGATATGCCCAATGGTTACTCCAAGGTGACATGGGTGGAGCATGCAGAATACGATGAAAGTCAAGTTCACCAGCTCTATAGACCTTTGTTGAGCTCAGGCATGGGGTTTGGTGCCCAACGTTGGGTCGCTACCCTTCAACGCCAATGCGAGTGCCTTGCCATTCTAATGTCCTCAGCAGCACCCTCTCGAGATCATTCCGCAATAACAGCAGGGGGAAGGCGGAGCATGATGAAGCTGGCGCAGCGGATGACGAACAACTTCTGCGCGGGGGTGTGCGCGTCGACGGTGCACAAGTGGAACAAGCTCAACGCCGGCAACGTCGACGAGGACGTCAGGGTCATGACTCGCAAGAGCGTCGACGATCCCGGGGAGCCACCGGGGATCGTCCTCAGCGCCGCCACCTCCGTCTGGCTACCCGTCTCCCCCCACCGCCTCTTCGATTTCCTCCGCGACGAGCGCCTCCGCAGCGAGTGGGACATCCTCTCCAACGGTGGCCCCATGCAGGAGATGGCCCACATCGCCAAGGGCCAAGACCACGGCAACGCAGTCTCTCTCCTTAGAGCCCGTGCGATAAATTCCAACCAGAGTAGCATGCTGATACTGCAGGAGACATGCATAGACGCGGCGGGGTCGCTTGTGGTGTACGCGCCGGTGGATATCCCAGCAATGCACGTTGTAATGAACGGTGGCGATTCTGCTTACGTGGCGTTGTTACCTTCAGGGTTCGCTATCGTCCCCGATGGGCCCGGGTCTCGTGGGCCACCGAACGGGCCCACTTCCACAACAAACGGCGGCGATAACGGCGTGACGCGCGTGAGTGGGTCCCTTCTGACGGTGGCGTTTCAGATCCTTGTGAATAGTCTCCCTACGGCGAAGCTCACGGTAGAGTCGGTGGAAACCGTGAACAACCTCATCTCGTGCACGGTTCAGAAGATCAAAGCCGCGCTCCACTGCGAAAGTTAA 2487 0.5376 MSFGGLLDNKSGSGGARNNVSDIPYNNNNVTNTTTTNNDRMPFGAISQPRLVTTTPTLAKSMFNSSGLSLALQTNIDGQEDVNRMAENTSEPNGLRRSREDEHESRSGSDNMDGASGDEHDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPMCSNCGGPAIIGEISLEEQHLRIENARLKDELDRVCVLAGKFLGRPVSSLPSSSLELGMRGNGFAGIPAATTLPLGQDFDMVMSVSMNNNALAMVSPPTSARAAAAGFDRSVERSMFLELALAAMDELVKIAQTGEPLWMRNAEGGREILNNEEYVRTFTPCIGLRPNGFVSEASRENGMVIINSLALVETLMDSNRWAEMFPCIIARTSTTEVISSGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDSIRESSGAPTFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYRPLLSSGMGFGAQRWVATLQRQCECLAILMSSAAPSRDHSAITAGGRRSMMKLAQRMTNNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPHRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNAVSLLRARAINSNQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGPPNGPTSTTNGGDNGVTRVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCES* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0668 828 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 73 825 IPR042160 -
Gso7g0668 828 CDD START_ArGLABRA2_like 330 558 - -
Gso7g0668 828 SUPERFAMILY Bet v1-like 328 559 - -
Gso7g0668 828 MobiDBLite consensus disorder prediction 79 136 - -
Gso7g0668 828 MobiDBLite consensus disorder prediction 755 775 - -
Gso7g0668 828 Pfam START domain 335 559 IPR002913 GO:0008289
Gso7g0668 828 SMART START_1 335 559 IPR002913 GO:0008289
Gso7g0668 828 Gene3D - 403 556 IPR023393 -
Gso7g0668 828 SUPERFAMILY Homeodomain-like 112 186 IPR009057 -
Gso7g0668 828 ProSiteProfiles START domain profile. 326 562 IPR002913 GO:0008289
Gso7g0668 828 SMART HOX_1 127 190 IPR001356 GO:0003677
Gso7g0668 828 ProSitePatterns 'Homeobox' domain signature. 161 184 IPR017970 GO:0000981|GO:0006355
Gso7g0668 828 MobiDBLite consensus disorder prediction 93 128 - -
Gso7g0668 828 Pfam Homeodomain 129 184 IPR001356 GO:0003677
Gso7g0668 828 MobiDBLite consensus disorder prediction 12 44 - -
Gso7g0668 828 SUPERFAMILY Bet v1-like 585 821 - -
Gso7g0668 828 Gene3D - 115 202 - -
Gso7g0668 828 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 73 825 - -
Gso7g0668 828 Coils Coil 180 212 - -
Gso7g0668 828 CDD homeodomain 128 186 IPR001356 GO:0003677
Gso7g0668 828 ProSiteProfiles 'Homeobox' domain profile. 126 186 IPR001356 GO:0003677
Gso7g0668 828 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0668 Gso-Chr7 7117616 7125404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0668 1 828 Homeobox Transcription Factor Family AT3G61150 64.755 0.0 1050
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gso7g0668 START 3.2e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0668 K09338 - gmx:100811873 1605.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0668 7 7117616 7125404 Gso7g0668 7 7117616 7125404 ECH