Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0648 ATGTCAGGAGTGAACAACAGGAGTGAGCTTTCTCCATTGGATCAAGGAAACAAGACTCTCACTCGGCGTGGGAGATGGAGTCAAGAAGAACACATGTTGTTTCTCTTGGGACTTGAGATATATTCAAGGGGAGATTGGATAAACATTGCAACAAACGTTGTTAAGACAAGAAGTCCAACTCAAGTGGCTAGTCATGCCCAAAAGTATTTTTGTCGTCAGGCCTCCAACAATACAGGCAAAAGAAGAAGCATTCATGACATTACCATACAACACCCCATCCCTCTCCAGAATTTCCTTGCTTCTCCAAACACCAATCTTGCAATGCATCACTCATTCCCTCACCACATCAATCAACAGAATCAGAGTTTTTCTTCAAATCTTCCAATGCATCATCTCTCAGTCCCTTACCACTTCAATCACCAGACTCAGGTTTTTTGTTCAAATCTTGCAATGCAGCAGTTTCATGAAATTCCTCATTCAGTCCCTCAGCACATCAATCAGCAGAATCAGGTTGGTTCTTCAAATCTTGCAATGCAAGAGTTACTTGGAAGGCATCTCTATGTCCCTGACCACATCAATCACCAGAATCAGGCTGTTTCTCCCAATCTTGCAATGCAACAGTTACATGGAGTTCAGCATTCAGTCCCTGGCTACATCAATCAGCAGAATCAGGTTTCTTCTCCAAATCTTGCAATGCAACAGTTACATGGAGTTCAGCATTCAGTCCCTGACCACATCAATCAGAAGAATCAGGTTTCTTCTCCAAATCTTGCAATGCAACAATTACATGGAATTCATCATTCAGTCCCTGACCACATCAATCAGAAGAATCAGGTTTCTTCTCCAAATCTTGCAATGCAACAATTACATGGAATTCATCATTCAGTCCCTGACCACATCAATCAGCAGAATCAGGTTTCTTCTCCAAATCTTGCAATGCAACAGTTACATGGAGTTCAGCATTCAGTCCCTGGCCACATCAATCAGCAGAATCAGGTTGCTTCTCCAAATCTTGCAATGCAACAGTTACATGGAGTTCAGCATTCAGTCCCTGGCCACATCAATCAGCAGAATCAGGTTTCTTCTCCAAATCTTGCAATGCAACAGTTACATGGAGTTCAGCATTCAGTCCCTGACCACATCAATCAGAAGAATCAGGTTTCTTCTCCAAATCTTGCAATGCAACAGTTACATGGAGTTCAGCATTCAGTCCCTGGCCACATCAATCAGCAGAATCAGGTTGCTTCTCCAAATCTTGCAATGCAACAGTTACATGGAGTTCAGCATTCAGTCCCTGGCCACATCAATCAGCAGAATCAGGTTTATTCTCCAAATCTTGCAATGCAACAGTTACATGGAGTTCAGCATTCAGTCCCTGATCACATCAATCAGCAGAATCAGGTTTCTTCTCCAAATCTTGCAATGCAACAATTACATGGAATTCATCATTCAGTCCCTGACCACACCAACCAGCAACATTAG 1482 0.4258 MSGVNNRSELSPLDQGNKTLTRRGRWSQEEHMLFLLGLEIYSRGDWINIATNVVKTRSPTQVASHAQKYFCRQASNNTGKRRSIHDITIQHPIPLQNFLASPNTNLAMHHSFPHHINQQNQSFSSNLPMHHLSVPYHFNHQTQVFCSNLAMQQFHEIPHSVPQHINQQNQVGSSNLAMQELLGRHLYVPDHINHQNQAVSPNLAMQQLHGVQHSVPGYINQQNQVSSPNLAMQQLHGVQHSVPDHINQKNQVSSPNLAMQQLHGIHHSVPDHINQKNQVSSPNLAMQQLHGIHHSVPDHINQQNQVSSPNLAMQQLHGVQHSVPGHINQQNQVASPNLAMQQLHGVQHSVPGHINQQNQVSSPNLAMQQLHGVQHSVPDHINQKNQVSSPNLAMQQLHGVQHSVPGHINQQNQVASPNLAMQQLHGVQHSVPGHINQQNQVYSPNLAMQQLHGVQHSVPDHINQQNQVSSPNLAMQQLHGIHHSVPDHTNQQH* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0648 493 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 74 IPR017930 -
Gso7g0648 493 PANTHER TRANSCRIPTION FACTOR KUA1 17 224 - -
Gso7g0648 493 ProSiteProfiles SANT domain profile. 21 74 IPR017884 -
Gso7g0648 493 Pfam Myb-like DNA-binding domain 23 70 IPR001005 -
Gso7g0648 493 ProSiteProfiles Myb-like domain profile. 18 70 IPR001005 -
Gso7g0648 493 MobiDBLite consensus disorder prediction 1 22 - -
Gso7g0648 493 Gene3D - 24 74 - -
Gso7g0648 493 SMART sant 22 72 IPR001005 -
Gso7g0648 493 SUPERFAMILY Homeodomain-like 22 74 IPR009057 -
Gso7g0648 493 PANTHER TRANSCRIPTION FACTOR KUA1 17 224 - -
Gso7g0648 493 CDD SANT 25 70 IPR001005 -
Gso7g0648 493 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 23 73 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0648 Gso-Chr7 6908055 6909933 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso7g0648 Myb_DNA-binding 6.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0648 - - gsj:114417662 1024.23