LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso7g0644	ATGGATGTTGCTTTTAGGTTACCACAGTCAAATGTGGTATTGGATGGTTTGGATTCTTGCATTGTATTTGGAGGGAGAGGCGTTGGTTGTGCTTTTCTCGGCAACTCGAGGACTATTCCGAAGGCTCGTTTTAGTGGGGTGAATAAGATAGGTAGTAGGAGTAGTTCAAGAGTAGAATGCGTAGGAGAGTTGAAAGTTCCAATTGGGAAGAGGGGTTTGTCTTGGAAGAATAATAGACTTTTTAGGAAGAATAGGGAAATTTGGTCAAAGTGTCAGGGTAATGATTCTTTATCATATGTCAATGGCAATGGACGGAATGTTGGTAGGGTGGAAGGTGCGGATGAGGACTCTGATTCCAGTGCTGAATTGAGTGAACCTTTGGGAGAAGAAGAAAAAGGGCAAGGAGGGAGGAAAGAAGATGGGGGTGGAGTAGAAATAGAGGTACAAAATGTGGATGAATTGAAAGAACTGTTGCAAAAGGCCATGAAAGCATTAGAAGCTGCTCGAGTTAACAGCATCATTTTCGAGGAAAAGGTTAAGAAGATATCGGAGACCGCAATTTTTTTGCAGGATGAAGCAGCAAGTGCTTGGAACAATGTTACTTCTACCCTTGATGTCATCCAAGATATTGTGAGTCAAGAATTTGTTGCCAAAGAAGCTGTTCAGAAAGCAACTATGGCTCTTTCTCTGGCTGAGGCAAGGCTTCAAGTGGCCATAGACTCTTTGGAGGTTACAAAAGAAGTTTATGATACCCCACAAGGTTCTAACAAGAGTAATGGCGATAAAGATATAATTCAAGAGGAGAAAGAACTTTTGGTTGCTCAGGAGGATATCAGGGAATGCCAGACAGATTTAGCAAATTGTGAGAATGAGCTGAGATGCTTGCAATGTAGAAAGGAGGAGTTGCAGAATGAAGTGAACAAATTGCATGAAATTGCAGAACAGGCACAGCTGAAAGCAGCGAAGGCAGAAGAAGATGTTGCAAACATAATGCTTTTAGCAGAGCAAGCTGTTGCCGCTGAACTAGAGGCTGCACAATGCATGAATGATGCAGAGATTGCATTACAGAAAGCAGACAAATCTTCCTCTAGTTCTAATGCTGATACCGCAGACACTCTACAAGTACAAGATGTTGTGGCTATTCCTGAGGAGGAAGTGGTTCAAGGTTTATCTGGTGATGATGCTGATAAAAGAGAGATTGACTACTTAATCGATGGTGAGCCTTTGCTAGCAATGCAATTGCCAGAAACACAATCTAATAACACCAGCAAAAGTTTGGAAGACATGGTACAGTCTGATTATCTGAGGGATCATGAGAATGGACAGTTAAGCTTAGACTCTCCTAAAGAAGCTGAAGTTGAAATAGAAAAGTCAAAGAATGTAGTTCAAACAAAAAAGCAGGAAACACAGAAAGATTCGGCAAGAGATAACTCACCGTTGGCTCCCAAGGCATCATTGAAGAAGTCTTCCCGATTTTTTCCAGCATCATTCTTCTCTTTTACTGCAGATGAGACTGATTACACACCAGCATCAGTTTTCCATGGTCTTGTGGAGTCTGCACAGAAGCAACTACCCAAGCTGATTGTTGGGTTATTGTTAATTGGAGCAGGGCTTGTGTTCTACACCAATAGAACAGAGAGGAGTGCCCAGCTGCTTCAGCAGCCAGAAGTCATTGCAATCACTGTTGAAGAAGTTTCTTCAACTGCAAAGCCTCTGGTTAGACAGCTTCAGGAGCTTCCCAGGAGAATTAAGAATATCATTGCATCATTACCTGATCAAGAGGTGGATGAGGAGGAAGCCTCCCTCTTTGACATGCTCTGGTTACTACTTGCAAGTGTTGTATTTGTGCCAATATTTCAAAAGATTCCTGGAGGCAGTCCTGTTCTTGGCTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGTCTCTCCATCATTCGTCATGTTCATGGAACAAAAGCAATAGCCGAGTTTGGAGTTGTTTTCCTGTTATTCAATATTGGCCTGGAGCTCTCTGTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCTCAGGTTTTGGTGACTGCTGTAGTTGTTGGCTTGGTGGCTCATTATATTTGTGGTCAAGCTGGCCCTGCTGCTATTGTCATTGGGAATGGCTTGGCATTATCATCAACTGCTGTTGTTCTGCAGGTTTTACAGGAGAGAGGTGAGAGCACATCACGGCATGGAAGGGCTACATTTTCTGTTCTTCTTTTTCAGGATTTGGCTGTTGTTGTCTTGCTAATACTCATACCTCTTGTTTCACCTAATTCTTCCAAAGGAGGGGTTGGTTTCCAAGCCATTGCTGAAGCTCTTGGTCTGGCTGCTGTTAAGGCAGTGGTTGCCATTTCAGCCATAATTGCTGGTGGACGATTGCTCCTTCGGCCCATATATAAGCAGATTGCAGAGAATCAAAATGCAGAAATATTTTCTGCCAATACACTCTTTGTTATTCTTGGGACTAGCCTTCTCACAGCCAGGGCTGGACTTTCCATGGCATTGGGGGCATTTTTGGCTGGTTTACTACTGGCAGAAACTGAGTTTTCCTTACAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTACTGGGTCTCTTCTTTATGACGGTCGGAATGTCAATTGATCCAAAACTTCTTCTTTCAAACTTTCCAGTCATTACAGGGACCTTGGGACTCTTGATATTTGGCAAGACTTTGTTGGTTACTTTAATTGGCAGAGTTTTTGGTATTTCTCTCATTTCTGCCATCAGAGTGGGTCTTCTTCTTGCTCCAGGGGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAAATGTCCTCTTTACTGTTTCTTGTCGTGGGAATTTCAATGGCCCTCACTCCATGGCTAGCTGAAGGAGGTCAGCTCCTTGCTTCCCGTTTTGAGCTGCATGATGTTCGAAGTTTATTGCCTGTGGAAAGTGAGACAGATGATCTGCAAAATCACATCATAATTTGTGGATTTGGGCGAGTTGGGCAGATCATTGCACAACTTCTTTCTGAGCAACTTATTCCCTTTGTTGCACTAGACGTGAGAAGTGATAGAGTGGCAATTGGGCGTTCCCTAGATCTCCCTGTGTACTTTGGAGATGCTGGTAGTCGAGAGGTCCTACACAAGGTTGGGGCTGAAAGGGCAAGTGCTGCTGCGGTAACTCTAGATTCCCCTGGAGCAAATTATAGAACAGTTTGGGCTCTGAGCAAGCACTTCCCAAACGTGAAGACTTTTGTCCGTGCTCATGATGTTGATCATGGATTGAATTTAGAAAAGGCTGGAGCTACCGCTGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCCGCCGTGCTTGCTCAGGCTAAACTTCCTACATCGGAGATTGCAGCGACTATAAATGAATTCAGATCCCGTCATCTGGCTGAGCTCACTGAACTATCCGAAACAAATGGAACTTCTTTTGGATATGGATATAATAGAATTACGAGCAAAGCCAGATCTCAATCCCTAGATTCATCAGATGATACTCAAGTCTCTGAAGGTAAACTGGCGACATGA	3621	0.435	MDVAFRLPQSNVVLDGLDSCIVFGGRGVGCAFLGNSRTIPKARFSGVNKIGSRSSSRVECVGELKVPIGKRGLSWKNNRLFRKNREIWSKCQGNDSLSYVNGNGRNVGRVEGADEDSDSSAELSEPLGEEEKGQGGRKEDGGGVEIEVQNVDELKELLQKAMKALEAARVNSIIFEEKVKKISETAIFLQDEAASAWNNVTSTLDVIQDIVSQEFVAKEAVQKATMALSLAEARLQVAIDSLEVTKEVYDTPQGSNKSNGDKDIIQEEKELLVAQEDIRECQTDLANCENELRCLQCRKEELQNEVNKLHEIAEQAQLKAAKAEEDVANIMLLAEQAVAAELEAAQCMNDAEIALQKADKSSSSSNADTADTLQVQDVVAIPEEEVVQGLSGDDADKREIDYLIDGEPLLAMQLPETQSNNTSKSLEDMVQSDYLRDHENGQLSLDSPKEAEVEIEKSKNVVQTKKQETQKDSARDNSPLAPKASLKKSSRFFPASFFSFTADETDYTPASVFHGLVESAQKQLPKLIVGLLLIGAGLVFYTNRTERSAQLLQQPEVIAITVEEVSSTAKPLVRQLQELPRRIKNIIASLPDQEVDEEEASLFDMLWLLLASVVFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHYICGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLVSPNSSKGGVGFQAIAEALGLAAVKAVVAISAIIAGGRLLLRPIYKQIAENQNAEIFSANTLFVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFPVITGTLGLLIFGKTLLVTLIGRVFGISLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQMSSLLFLVVGISMALTPWLAEGGQLLASRFELHDVRSLLPVESETDDLQNHIIICGFGRVGQIIAQLLSEQLIPFVALDVRSDRVAIGRSLDLPVYFGDAGSREVLHKVGAERASAAAVTLDSPGANYRTVWALSKHFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATINEFRSRHLAELTELSETNGTSFGYGYNRITSKARSQSLDSSDDTQVSEGKLAT*	1207

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso7g0644	1206	MobiDBLite	consensus disorder prediction	125	144	-	-
	Gso7g0644	1206	TIGRFAM	2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family	609	889	IPR004771	GO:0006812\|GO:0008324\|GO:0016021
	Gso7g0644	1206	Pfam	TrkA-N domain	1011	1124	IPR003148	GO:0006813
	Gso7g0644	1206	PANTHER	K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED	1	1205	-	-
	Gso7g0644	1206	Coils	Coil	271	333	-	-
	Gso7g0644	1206	MobiDBLite	consensus disorder prediction	108	144	-	-
	Gso7g0644	1206	ProSiteProfiles	RCK N-terminal domain profile.	1010	1132	IPR003148	GO:0006813
	Gso7g0644	1206	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	1007	1148	IPR036291	-
	Gso7g0644	1206	PANTHER	K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC	1	1205	-	-
	Gso7g0644	1206	MobiDBLite	consensus disorder prediction	440	473	-	-
	Gso7g0644	1206	MobiDBLite	consensus disorder prediction	440	483	-	-
	Gso7g0644	1206	Gene3D	-	598	985	IPR038770	-
	Gso7g0644	1206	Coils	Coil	144	171	-	-
	Gso7g0644	1206	MobiDBLite	consensus disorder prediction	1186	1206	-	-
	Gso7g0644	1206	Pfam	Sodium/hydrogen exchanger family	607	978	IPR006153	GO:0006812\|GO:0015299\|GO:0016021\|GO:0055085
	Gso7g0644	1206	Gene3D	-	1006	1170	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso7g0644	Gso-Chr7	6849171	6860141	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso7g0644	91	1205	Inorganic Solute Cotransporters	AT4G00630	69.823	0.0	1407

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso7g0644	-		-	gmx:100791174	2149.4

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso7g0644	7	6849171	6860141	Gso7g0644	7	6849171	6860141	ECH
	Gso7g0644	7	6849171	6860141	Gso3g0115	3	1382630	1395042	GST
	Gso18g1988	18	52480774	52495166	Gso7g0644	7	6849171	6860141	PCT
	Gso9g2159	9	45863348	45876985	Gso7g0644	7	6849171	6860141	PCT
	Gso7g0644	7	6849171	6860141	Gso18g1988	18	52480774	52495166	PCT
	Gso7g0644	7	6849171	6860141	Gso9g2159	9	45863348	45876985	PCT