Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0628 ATGGGTATTCAGTGCTCCAGACTCATCCCGTGCTGTGTGGATTCACAAGTTAAGGCCTCTGTTATTGAAACTCCAGATGCTGAAATTGAGGATAGTAGTGAGGTCAGTAACTGGCCTACATTTCGTGAATATACACTTGAGCAACTCAAGAATGCTACATCTGGTTTTGCTGTTGAGAACATTGTATCTGAACATGGAGAGAAGGCTCCAAATGTTGTTTATAAAGGAAAGCTGGAGAATCAAATGAGGATTGCTGTTAAGCGGTTTAATAGGAATGCTTGGCCAGATGCTCGGCAGTTTTTGGAGGAAGCAAGATCAGTTGGTCAGCTTCGTAACCAAAGGTTGGCAAATTTGCTTGGTTGTTGCTGTGAAGGAGAGGAGAGGTTGCTTGTGGCAGAATATATGCCCAATGAAACACTTGCAAAGCACCTTTTTCATTGGGAAACACAACCCATGAAATGGGCAATGCGACTAAGAGTTGTTCTACATCTTGCACAAGCTCTAGAATACTGCACAAGCAAAGGGCGTGCTCTCTATCATGACCTCAATGCATATAGAGTTCTTTTTGATGAGGATGGTAATCCTAGGCTTTCAAGTTTTGGTCTTATGAAAAATAGCAGGGATGGGAAAAGTTATAGCACAAATTTGGCATTTACCCCTCCAGAGTATCTTAGAACTGGGAGAGTGACACCAGAAAGTGTAATATATAGCTTTGGAACCCTTTTGCTTGACCTTCTCAGTGGGAAGCATATCCCCCCAAGTCATGCCCTTGATGTGATTCGTGGAAGAAATCTTCAGATGCTGACAGATTCTTGTTTGGAAGGACAATTTTCAGATGACGATGGAACTGAGTTAGTACGCTTGGCATCTAGATGTTTACAGTATGAACCTAGAGAACGGCCTAATCCAAAATCATTGGTAGTTGCTTTGGCTCCTCTTCAGAAGGAAACAGAGGTTCCTTCACATGTCTTGATGGGCATCCAGCATAGTACTACTTTTGCTTCATTATCTCCACTTGGTGAAGCATGCTCAAGAAAAGACTTGACTGCCATACAAGAAGTTCTGGAAAGTATTGGCTATAAAGATGACGAAGGAGTGGCAAATGAGTTATCATTTCACATGTGGACTGATCAAATGCAGGACACATTAAATTGCAAGAAAAAGGGAGATGTTGCTTTCCGGCAGAAAGATTTTAGACTGGCAATTGAGTGCTACTCGCAGTTCATAGATGCTGGAACAATGGTTTCTCCAACAGTCTATGCACGGCGCAGTTTGTGTTATCTCATAAGTGACATGCCTCAGGAATCTCTGAACGATGCAATACAGGCACAAATCGTTTCCCCGGTATGGCACATAGCATCTTATCTTCAATCTGTTGCCCTCACAGGACTTGGGATGGAGAATGAAGCTCAGGCAGCACTAAAAGAGGGCACAACAATGGAATCCAAGCGGAATGCAACTCCCAAGCAAAAATGA 1476 0.4289 MGIQCSRLIPCCVDSQVKASVIETPDAEIEDSSEVSNWPTFREYTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDARQFLEEARSVGQLRNQRLANLLGCCCEGEERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDVIRGRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNPKSLVVALAPLQKETEVPSHVLMGIQHSTTFASLSPLGEACSRKDLTAIQEVLESIGYKDDEGVANELSFHMWTDQMQDTLNCKKKGDVAFRQKDFRLAIECYSQFIDAGTMVSPTVYARRSLCYLISDMPQESLNDAIQAQIVSPVWHIASYLQSVALTGLGMENEAQAALKEGTTMESKRNATPKQK* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0628 491 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Gso7g0628 491 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0628 491 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
Gso7g0628 491 Gene3D Tetratricopeptide repeat domain 380 491 IPR011990 GO:0005515
Gso7g0628 491 PANTHER LRR RECEPTOR-LIKE KINASE 1 490 - -
Gso7g0628 491 SUPERFAMILY TPR-like 381 479 IPR011990 GO:0005515
Gso7g0628 491 SUPERFAMILY Protein kinase-like (PK-like) 34 316 IPR011009 -
Gso7g0628 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 490 IPR045845 GO:0004672|GO:0009742
Gso7g0628 491 Pfam Protein tyrosine and serine/threonine kinase 72 308 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0628 Gso-Chr7 6675258 6682648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0628 30 313 Glycoside Hydrolase AT3G07070 33.013 6.44e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Gso7g0628 PK_Tyr_Ser-Thr 5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0628 K14500 - gmx:100799260 990.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0628 7 6675258 6682648 Gso7g0628 7 6675258 6682648 ECH
Gso7g0628 7 6675258 6682648 Gso3g0094 3 1035005 1042236 GST