Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0619 ATGGCCAACAACGGGAGTCCAAAGCATAAGAAGATGCAAAAGAACCTATGCACACAACTAGCTGTTGCAGTGAGAAGCACTCAATGGAGCTATGGTATTTTCTGGGCACCTTCAACCACTGAAGAAAGGGTATTGGAATGGAGGGAAGGGTACTATAATGGAGACATTAAGACAAGAAAGACAGTCCAAGCCATGGAATTGGAAATGAAGGCTGATAAAATAGGACTGCAGAGGAGTGAGCAACTGAAGGAACTGTACAAGTTTCTTCTTGCAGGTGAAGCTGATCCACAAACTAAAAGGCCTTCTGCTGCATTAGCTCCAGAGGACCTCTCAGATTTGGAGTGGTATTACTTGGTTTGCATGTCCTTTGTTTTCAATCACAACCAAAGTTTGCCTGGAAGAGCACTAGAAATTGGTGACACTGTCTGGTTATGCAATGCTCAACATGCTGATAGTAAAATTTTCTCTCGTTCTTTGCTAGCAAAGAGTGCGTCAGTTCAGACCGTGGTGTGTTTTCCCTATCAGAAAGGCGTTATTGAGATAGGCACAACTGAACTGGTTACTGAGGATCCTAGTCTCATACAACATGTCAAGGCTTGCTTCTTAGAAATCTCAAAGCCTACATGCTCTGATAAATCTTCCTCTGTCCTTGATAAGCCACATGATGACAAATATCCAACATGCACCAAGGGTGACCAAAGGGTGTTAGAAACAATGGCTCTGGAGAACCCATGTTCCCTTGAAGAAAATATCAAATTTGATCATGACCCCATCAATGAATTGCAAGATGGCAACAACGAAGATTCTAACATGGATTCTCCTGATGGTTGTCAGCATCATTTCCCTATGGATGGATCCATGATTGAGGGTATCAATGGTGTGCCATCTCAAGTTCATTTTGTGAATGAAGCCTTAGTCATTGGTGCTCCAGATTCTTTGAGTTCTTGTGATTGTATGTCTGAGGCTTCTGAGAACCAAGGCAATGATTCCAAGAATGTAGACCAAACTCAACTTATGGAACTTCAATATTGCCATAAACCAAAGAGAAGCTCCATGGATGTTGGAGCTGATGAGGACTTGTGCTACATAAGAACACTTTGTGCTATTTTGGGGAACTCATCAACTTTTAAACCAAACCCTTATGCTGGTAACTCAAATTGCAAATCTAGTTTTGCGAAATGGAAGAAAGGGAGAGTTTCTGAAAGGAAGAGGCCAAAGTTGCACCAAAGCATGTTAAAGAAGACTTTGTTTAATGTCCCTTTTATGCATAGAAGTTACTCTTCTCTCAAGTCACAAAAAGAGAATGGCAGAATGAAATGGACTAGTAAATTGGAAAATGCTAATGATGGTTTCATGGAGAAAACATTCTCTGATAAGAAAAGAGAAAATAAAAACTTTCATGTTGTCAAACCAATGGTTCCATCTTCTATAAGTGAGGTAGAAAAAATTTCAATTCTTGGAGACACAATTAAGTACTTGAAAAAGCTTGAGACAAGAGTGGAAGAGCTAGAATCTTACATGGAAGTTACAGACCCTGAAGCAAGAATCAGGAGAAAATGCCCTGATGTTCCAGAGCAGATGTCAGATAACTATGGCACCAGAAAGATTTGCATGGGAATGAAACCTTGGGTGAACAAGAGGAAGGCTTGTGGTATTGATGAGATAGACACAGAGCTAGAAAGAATTGTTTCTGAAGAATCAAAGGTTTTGGATGTGAAAGTCAATGTGAAGGAGCAGGAGGTTCTGATTGAGATGAAATGTCCTTACAGGGAATACATACTGTATGACATCATGGATACCATTAACAACCTACATTTAGATGCTCAAACAGTTGAATCATCAACAAGTGATGGTGTTCTCACATTGACACTTAAATCTAAGTTTCGAGGAGCAGCAACAGCACCAACGAGGATGATCAAAGAAGCACTCTGGAAAGTATCTGGAAATACTTGA 1953 0.403 MANNGSPKHKKMQKNLCTQLAVAVRSTQWSYGIFWAPSTTEERVLEWREGYYNGDIKTRKTVQAMELEMKADKIGLQRSEQLKELYKFLLAGEADPQTKRPSAALAPEDLSDLEWYYLVCMSFVFNHNQSLPGRALEIGDTVWLCNAQHADSKIFSRSLLAKSASVQTVVCFPYQKGVIEIGTTELVTEDPSLIQHVKACFLEISKPTCSDKSSSVLDKPHDDKYPTCTKGDQRVLETMALENPCSLEENIKFDHDPINELQDGNNEDSNMDSPDGCQHHFPMDGSMIEGINGVPSQVHFVNEALVIGAPDSLSSCDCMSEASENQGNDSKNVDQTQLMELQYCHKPKRSSMDVGADEDLCYIRTLCAILGNSSTFKPNPYAGNSNCKSSFAKWKKGRVSERKRPKLHQSMLKKTLFNVPFMHRSYSSLKSQKENGRMKWTSKLENANDGFMEKTFSDKKRENKNFHVVKPMVPSSISEVEKISILGDTIKYLKKLETRVEELESYMEVTDPEARIRRKCPDVPEQMSDNYGTRKICMGMKPWVNKRKACGIDEIDTELERIVSEESKVLDVKVNVKEQEVLIEMKCPYREYILYDIMDTINNLHLDAQTVESSTSDGVLTLTLKSKFRGAATAPTRMIKEALWKVSGNT* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0619 650 PANTHER TRANSCRIPTION FACTOR MYC1 2 648 - -
Gso7g0619 650 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 201 IPR025610 -
Gso7g0619 650 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 461 512 IPR036638 GO:0046983
Gso7g0619 650 Gene3D - 459 520 IPR036638 GO:0046983
Gso7g0619 650 PANTHER TRANSCRIPTION FACTOR TT8 2 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0619 Gso-Chr7 6604093 6609739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0619 5 647 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 38.754 2.05e-125 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0619 - - gmx:100783746 1322.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0619 7 6604093 6609739 Gso7g0619 7 6604093 6609739 ECH
Gso7g0619 7 6604093 6609739 Gso3g0084 3 937017 942743 GST