LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso7g0619	ATGGCCAACAACGGGAGTCCAAAGCATAAGAAGATGCAAAAGAACCTATGCACACAACTAGCTGTTGCAGTGAGAAGCACTCAATGGAGCTATGGTATTTTCTGGGCACCTTCAACCACTGAAGAAAGGGTATTGGAATGGAGGGAAGGGTACTATAATGGAGACATTAAGACAAGAAAGACAGTCCAAGCCATGGAATTGGAAATGAAGGCTGATAAAATAGGACTGCAGAGGAGTGAGCAACTGAAGGAACTGTACAAGTTTCTTCTTGCAGGTGAAGCTGATCCACAAACTAAAAGGCCTTCTGCTGCATTAGCTCCAGAGGACCTCTCAGATTTGGAGTGGTATTACTTGGTTTGCATGTCCTTTGTTTTCAATCACAACCAAAGTTTGCCTGGAAGAGCACTAGAAATTGGTGACACTGTCTGGTTATGCAATGCTCAACATGCTGATAGTAAAATTTTCTCTCGTTCTTTGCTAGCAAAGAGTGCGTCAGTTCAGACCGTGGTGTGTTTTCCCTATCAGAAAGGCGTTATTGAGATAGGCACAACTGAACTGGTTACTGAGGATCCTAGTCTCATACAACATGTCAAGGCTTGCTTCTTAGAAATCTCAAAGCCTACATGCTCTGATAAATCTTCCTCTGTCCTTGATAAGCCACATGATGACAAATATCCAACATGCACCAAGGGTGACCAAAGGGTGTTAGAAACAATGGCTCTGGAGAACCCATGTTCCCTTGAAGAAAATATCAAATTTGATCATGACCCCATCAATGAATTGCAAGATGGCAACAACGAAGATTCTAACATGGATTCTCCTGATGGTTGTCAGCATCATTTCCCTATGGATGGATCCATGATTGAGGGTATCAATGGTGTGCCATCTCAAGTTCATTTTGTGAATGAAGCCTTAGTCATTGGTGCTCCAGATTCTTTGAGTTCTTGTGATTGTATGTCTGAGGCTTCTGAGAACCAAGGCAATGATTCCAAGAATGTAGACCAAACTCAACTTATGGAACTTCAATATTGCCATAAACCAAAGAGAAGCTCCATGGATGTTGGAGCTGATGAGGACTTGTGCTACATAAGAACACTTTGTGCTATTTTGGGGAACTCATCAACTTTTAAACCAAACCCTTATGCTGGTAACTCAAATTGCAAATCTAGTTTTGCGAAATGGAAGAAAGGGAGAGTTTCTGAAAGGAAGAGGCCAAAGTTGCACCAAAGCATGTTAAAGAAGACTTTGTTTAATGTCCCTTTTATGCATAGAAGTTACTCTTCTCTCAAGTCACAAAAAGAGAATGGCAGAATGAAATGGACTAGTAAATTGGAAAATGCTAATGATGGTTTCATGGAGAAAACATTCTCTGATAAGAAAAGAGAAAATAAAAACTTTCATGTTGTCAAACCAATGGTTCCATCTTCTATAAGTGAGGTAGAAAAAATTTCAATTCTTGGAGACACAATTAAGTACTTGAAAAAGCTTGAGACAAGAGTGGAAGAGCTAGAATCTTACATGGAAGTTACAGACCCTGAAGCAAGAATCAGGAGAAAATGCCCTGATGTTCCAGAGCAGATGTCAGATAACTATGGCACCAGAAAGATTTGCATGGGAATGAAACCTTGGGTGAACAAGAGGAAGGCTTGTGGTATTGATGAGATAGACACAGAGCTAGAAAGAATTGTTTCTGAAGAATCAAAGGTTTTGGATGTGAAAGTCAATGTGAAGGAGCAGGAGGTTCTGATTGAGATGAAATGTCCTTACAGGGAATACATACTGTATGACATCATGGATACCATTAACAACCTACATTTAGATGCTCAAACAGTTGAATCATCAACAAGTGATGGTGTTCTCACATTGACACTTAAATCTAAGTTTCGAGGAGCAGCAACAGCACCAACGAGGATGATCAAAGAAGCACTCTGGAAAGTATCTGGAAATACTTGA	1953	0.403	MANNGSPKHKKMQKNLCTQLAVAVRSTQWSYGIFWAPSTTEERVLEWREGYYNGDIKTRKTVQAMELEMKADKIGLQRSEQLKELYKFLLAGEADPQTKRPSAALAPEDLSDLEWYYLVCMSFVFNHNQSLPGRALEIGDTVWLCNAQHADSKIFSRSLLAKSASVQTVVCFPYQKGVIEIGTTELVTEDPSLIQHVKACFLEISKPTCSDKSSSVLDKPHDDKYPTCTKGDQRVLETMALENPCSLEENIKFDHDPINELQDGNNEDSNMDSPDGCQHHFPMDGSMIEGINGVPSQVHFVNEALVIGAPDSLSSCDCMSEASENQGNDSKNVDQTQLMELQYCHKPKRSSMDVGADEDLCYIRTLCAILGNSSTFKPNPYAGNSNCKSSFAKWKKGRVSERKRPKLHQSMLKKTLFNVPFMHRSYSSLKSQKENGRMKWTSKLENANDGFMEKTFSDKKRENKNFHVVKPMVPSSISEVEKISILGDTIKYLKKLETRVEELESYMEVTDPEARIRRKCPDVPEQMSDNYGTRKICMGMKPWVNKRKACGIDEIDTELERIVSEESKVLDVKVNVKEQEVLIEMKCPYREYILYDIMDTINNLHLDAQTVESSTSDGVLTLTLKSKFRGAATAPTRMIKEALWKVSGNT*	651

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso7g0619	650	PANTHER	TRANSCRIPTION FACTOR MYC1	2	648	-	-
	Gso7g0619	650	Pfam	bHLH-MYC and R2R3-MYB transcription factors N-terminal	18	201	IPR025610	-
	Gso7g0619	650	SUPERFAMILY	HLH, helix-loop-helix DNA-binding domain	461	512	IPR036638	GO:0046983
	Gso7g0619	650	Gene3D	-	459	520	IPR036638	GO:0046983
	Gso7g0619	650	PANTHER	TRANSCRIPTION FACTOR TT8	2	648	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso7g0619	Gso-Chr7	6604093	6609739	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso7g0619	5	647	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT1G63650	38.754	2.05e-125	382

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso7g0619	-		-	gmx:100783746	1322.76

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso7g0619	7	6604093	6609739	Gso7g0619	7	6604093	6609739	ECH
	Gso7g0619	7	6604093	6609739	Gso3g0084	3	937017	942743	GST

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