Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0601 ATGTCCCTCTTCATTCTCATTCTCATTCTCGTTCTCCATTCTCCCACTTGCTCAACCAGCACCATCATCCTCCAAGGCAACGCCACTCTCCAAAGCCCCAACAACACCTTCCGATTGGGCCTCTTCTCCTTCTCCCCCAACTCCTCCTTTTACCTCGCCATCCGCCACACCTCCCTCCCCTCCCCCAACACCATCTGGCTCGCCAACCGCCTCCACCCTTCTCCCTCCCAAACCGCTTCATCTCTCCAACTAACCCAAACCGGTCAATTACTCTTAACCCACTCCAACACCACTCTCTGGACCACCACCATCTCTAACATTCACCCTTCTAACTTCTCCTCCCTCTCCCTCAAGCTTCTCGACTCCGGTAACTTAATCCTCACCGCCCCCAACGGCGTCGTTTTATGGCAGAGCTTCGATTCCCCCACCGACACGTGGCTCCCCGGCATGAACCTTACTCGCCTCAACTCTCTTCTCTCCTGGCGAACCGAAACCGACCCTTCCCCGGGTCTTTACTCTCTACGCTTGAAGCCACCGTTCTACGGCGAGTTCGAGCTCGTCTTCAACGACACCGTTCCTTATTGGTCCACCGGCAACTGGACCAACGGGTCATTCCTCAACATCCCCGAGATGTCCATCCCCTACTTATACAACTTCCACTTCCTCTCCCCTTTCTCCCCCGCCGCGGCGTTCGGATTCTCCGAACGCGCCGAGTCGGAGGCCGGAAACCGGCCTCCGACGATGTTCCGAGTGGAGCCGTTCGGCCAAATCCAGCAGTACACGTGGAACAGTCAAGCAGGTTCGTGGAACATGTTTTGGTCTAAACCTGAGCCTTTGTGCCTGGTTCGGGGACTCTGCGGGAGGTTCGGGGTTTGCATTGGAGAAACTTCGAAGCCGTGTGAATGCATCAGTGGGTTTCAGCCTGTGGATGGTGATGGGTGGGGTTCTGGTGATTATTCTAGAGGCTGTTACCGTGGGGACTCGGGGTGTGATGGGAGTGATGGGTTTCGAGATCTGGGGAATGTGAGGTTTGGGTTCGGGAATGTGAGTTTGATTAAGGGGAAATCTAGAAGCTTTTGCGAGAGGGAGTGTTTGGGTGATTGTGGGTGTGTTGGGTTGAGTTTTGACGAGGGGAGTGGGGTGTGTAAGAATTTTTATGGGTCGCTTTCGGATTTTCAGAATTTGACTGGGGGTGGTGAAAGTGGGGGGTTTTATGTTAGGGTTCCGAGAGGGGGATCTGGTGGGAGGAAGGGGTTGGATAGGAAGGTTTTGGCTGGGGTTGTGATTGGGGTTGTTGTGGTTTCGGGGGTGGTGGTGGTGACTTTGTTGATGATGGTGAAGAAGAAGAGGGATGGTGGGAGAAAGGGGTTGTTGGAGGAGGATGGGTTTGTGCCTGTCTTGAATTTGAAGGTGTTTTCTTACAAGGAGCTTCAGTTGGCCACGCGCGGGTTCTCGGAGAAGGTTGGGCATGGAGGGTTTGGGACAGTGTTTCAGGGGGAGTTGAGTGATGCTTCGGTTGTGGCGGTGAAGAGGTTGGAGAGGCCAGGGGGTGGGGAGAAGGAGTTCAGGGCTGAGGTGTCAACAATTGGGAATATTCAGCATGTGAATCTTGTGAGGCTAAGAGGGTTTTGCTCTGAGAATTCTCATAGGCTTTTGGTTTATGAGTATATGCAGAATGGTGCTCTTAGTGTCTATTTGAGGAAGGAGGGACCTTGTTTGAGTTGGGATGTTAGGTTTAGGGTGGCTGTGGGGACTGCTAAGGGAATTGCTTATTTACATGAGGAGTGTAGGTGTTGCATCATACATTGTGATATCAAGCCTGAGAATATTCTCTTGGATGGAGATTTCACTGCCAAGGTTTCAGATTTCGGGCTGGCGAAGCTCATCGGGAGGGACTTCAGCAGGGTGTTGGCGACCATGAGGGGGACGTGGGGGTATGTTGCGCCGGAGTGGATTTCTGGCGTGGCGATTACCACCAAGGCGGATGTTTACAGCTATGGAATGACATTGCTGGAGCTGGTTGGCGGTCGGAGGAACGTGGAGGCACCGCCATCTGCCAGAGGAGGAGGAGGTGGTAGAGAGAGTGGCAGTGAGACGGGAACTAAGTGGTTCTTCCCGCCATGGGCGGCACAGCAGATAATTGAGGGGAATGTGAGTGATGTGGTGGATAAGAGGCTTGGGAATGGGTATAACATTGACGAGGCTAGGAGGGTTGCTTTGGTTGCAGTTTGGTGCATTCAAGATGATGAGGCAATGAGACCTACAATGGGTATGGTAGTGAAAATGTTGGAGGGGTTGGTGGAGGTGAGTGTTCCTCCACCACCCAAGTTGCTTCAAGCGCTGGTTACTGGGGATTCCTTTCATGGGGTTAAAGCTGATTCAGGCAATGGTGTGTCTACTGGTGGAAGCTTATCTGATGGCAACTTGGAAGTGTCAACTGCTGATTCTGAATCATATACAGGGAATGTTTTTTCTCCTTTGGATGTGAATGTCCATGTTAGTGTTCGATAA 2511 0.5253 MSLFILILILVLHSPTCSTSTIILQGNATLQSPNNTFRLGLFSFSPNSSFYLAIRHTSLPSPNTIWLANRLHPSPSQTASSLQLTQTGQLLLTHSNTTLWTTTISNIHPSNFSSLSLKLLDSGNLILTAPNGVVLWQSFDSPTDTWLPGMNLTRLNSLLSWRTETDPSPGLYSLRLKPPFYGEFELVFNDTVPYWSTGNWTNGSFLNIPEMSIPYLYNFHFLSPFSPAAAFGFSERAESEAGNRPPTMFRVEPFGQIQQYTWNSQAGSWNMFWSKPEPLCLVRGLCGRFGVCIGETSKPCECISGFQPVDGDGWGSGDYSRGCYRGDSGCDGSDGFRDLGNVRFGFGNVSLIKGKSRSFCERECLGDCGCVGLSFDEGSGVCKNFYGSLSDFQNLTGGGESGGFYVRVPRGGSGGRKGLDRKVLAGVVIGVVVVSGVVVVTLLMMVKKKRDGGRKGLLEEDGFVPVLNLKVFSYKELQLATRGFSEKVGHGGFGTVFQGELSDASVVAVKRLERPGGGEKEFRAEVSTIGNIQHVNLVRLRGFCSENSHRLLVYEYMQNGALSVYLRKEGPCLSWDVRFRVAVGTAKGIAYLHEECRCCIIHCDIKPENILLDGDFTAKVSDFGLAKLIGRDFSRVLATMRGTWGYVAPEWISGVAITTKADVYSYGMTLLELVGGRRNVEAPPSARGGGGGRESGSETGTKWFFPPWAAQQIIEGNVSDVVDKRLGNGYNIDEARRVALVAVWCIQDDEAMRPTMGMVVKMLEGLVEVSVPPPPKLLQALVTGDSFHGVKADSGNGVSTGGSLSDGNLEVSTADSESYTGNVFSPLDVNVHVSVR* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0601 836 ProSiteProfiles PAN/Apple domain profile. 330 408 IPR003609 -
Gso7g0601 836 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-2 11 822 - -
Gso7g0601 836 Gene3D Transferase(Phosphotransferase) domain 1 557 771 - -
Gso7g0601 836 CDD STKc_IRAK 488 766 - -
Gso7g0601 836 SUPERFAMILY Protein kinase-like (PK-like) 465 764 IPR011009 -
Gso7g0601 836 Gene3D Phosphorylase Kinase; domain 1 459 556 - -
Gso7g0601 836 Pfam S-locus glycoprotein domain 195 308 IPR000858 GO:0048544
Gso7g0601 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 600 612 IPR008271 GO:0004672|GO:0006468
Gso7g0601 836 PIRSF SRK 1 818 IPR024171 GO:0004674
Gso7g0601 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 50 200 IPR036426 -
Gso7g0601 836 Pfam Protein kinase domain 485 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0601 836 ProSiteProfiles Protein kinase domain profile. 482 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0601 836 SMART serkin_6 482 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0601 836 Pfam D-mannose binding lectin 64 154 IPR001480 -
Gso7g0601 836 ProSiteProfiles Bulb-type lectin domain profile. 15 140 IPR001480 -
Gso7g0601 836 CDD PAN_AP_plant 327 409 - -
Gso7g0601 836 Gene3D - 18 140 IPR036426 -
Gso7g0601 836 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 11 822 - -
Gso7g0601 836 SMART blect_4 21 142 IPR001480 -
Gso7g0601 836 ProSitePatterns Protein kinases ATP-binding region signature. 488 510 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0601 Gso-Chr7 6369085 6371951 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0601 472 773 Receptor kinase-like Gene Family AT5G20050 46.349 1.61e-82 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso7g0601 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0601 - - gmx:100778917 1617.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0601 7 6369085 6371951 Gso16g0285 16 3227303 3230084 GST