Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0598 ATGACATCTCCTTATGCTCCTCGCCGGCGATCCAGCTCCGACCACCGGACCACGCCCGGAAGAGCACCGCCCTCCCCCAGCTTCGCCTCTTCCGAGCTGAGCACCTCCTCCACCGTCTCCACCCACCGGAACCCCGTCTCCGCCGTCGCCAAGTCCTTCGCCGGAATCTTTGCCGGCTGCTTCGCTCGGCCGGATTTCGACAACTCCAAGAGCCTCGGGGATTCCGAGGAGTTCAAGTCTTCTTCCTCTGTATCGAATGCTTCAAGAGCTGGTAGTCAGAGAGGGCGTGGCTCAAATCGAGGTATCAGCATCAGTTCATACAACATATTGCCAGCGAAAGAACCAGGCATTGTGAAGTTCACCATGGAGGAAATCTTCCGAGTCACAAGGAACTTCTCCCCTTCTTTCAAGATTGGCCAAGGTGGTTTTGGTGCTGTCTATAAGGCCAAACTCCTAGATGGGACTGTTGTTGCAGTAAAGCGTGCTAAGAAGAGTATGTATGAGAAGCATTTGGGGGTGGAGTTCCAAAGCGAGATCCAAACACTATCACGGGTGGAACATTTGAACTTGGTCAAGTTCTTTGGATATTTGGAGCAAGAGGATGAAAGGATCATTGTTGTGGAGCATGTTCCAAATGGAACCCTTAGAGAACATTTAGATTGCATTCATGGAAGCGTTCTGGACCTTGCTGCACGTCTAGATATAGCAATTGATGTTTCTCATGCTATCACCTATCTTCATATGTATATAGATCATCCTATCATCCATAGAGACATAAAATCTTCAAACATTCTTCTCACTGAAAATTTTCGAGCTAAAGTAGCAGACTTTGGTTTTGCTAGACAAGCCCCTGACAGTGACTCTGGCATGACACATATTTCCACCCAAATAAAAGGAACAGCTGGCTACTTGGACCCTGAATACCTGAAAACTTATCAACTAACTGAAAAGAGTGACGTGTATTCATTTGGAGTTTTGCTTGTTGAACTTGTCACAGGCAGACGCCCCATTGAACCAAAATTTGAACTCAGGGAGCGAATCACGGCAAAATGGGCTATGAAGAGATTCATTGATGGAGATGCTATCTCAGTCTTGGACCCAAGACTGGATCAGACTACTGCAAATACTTTGGCACTAGAAAAGATTCTTGAGCTAGCTTTACAGTGCTTGGCTCCACGCAGACAAATTAGGCCTACTATGAAGAGATGTGCTGAGATCCTTTGGTCCATCCGCAAGGATTTCAGAGAGCAGCTATCAGCTTCGAACTTTCGCTCATTTTCCACTTCTTCCCAAAGAAGCACCTCAATAAAAGAGAAGTGA 1320 0.4697 MTSPYAPRRRSSSDHRTTPGRAPPSPSFASSELSTSSTVSTHRNPVSAVAKSFAGIFAGCFARPDFDNSKSLGDSEEFKSSSSVSNASRAGSQRGRGSNRGISISSYNILPAKEPGIVKFTMEEIFRVTRNFSPSFKIGQGGFGAVYKAKLLDGTVVAVKRAKKSMYEKHLGVEFQSEIQTLSRVEHLNLVKFFGYLEQEDERIIVVEHVPNGTLREHLDCIHGSVLDLAARLDIAIDVSHAITYLHMYIDHPIIHRDIKSSNILLTENFRAKVADFGFARQAPDSDSGMTHISTQIKGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELRERITAKWAMKRFIDGDAISVLDPRLDQTTANTLALEKILELALQCLAPRRQIRPTMKRCAEILWSIRKDFREQLSASNFRSFSTSSQRSTSIKEK* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0598 439 ProSiteProfiles Protein kinase domain profile. 132 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0598 439 MobiDBLite consensus disorder prediction 17 43 - -
Gso7g0598 439 Gene3D Transferase(Phosphotransferase) domain 1 210 432 - -
Gso7g0598 439 CDD STKc_IRAK 138 407 - -
Gso7g0598 439 MobiDBLite consensus disorder prediction 75 99 - -
Gso7g0598 439 PANTHER RECEPTOR-LIKE PROTEIN 55 8 427 - -
Gso7g0598 439 SMART serkin_6 132 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0598 439 ProSitePatterns Protein kinases ATP-binding region signature. 138 164 IPR017441 GO:0005524
Gso7g0598 439 PANTHER CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 2 8 427 - -
Gso7g0598 439 MobiDBLite consensus disorder prediction 1 43 - -
Gso7g0598 439 MobiDBLite consensus disorder prediction 72 99 - -
Gso7g0598 439 SUPERFAMILY Protein kinase-like (PK-like) 108 410 IPR011009 -
Gso7g0598 439 Gene3D Phosphorylase Kinase; domain 1 98 209 - -
Gso7g0598 439 Pfam Protein kinase domain 137 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0598 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0598 Gso-Chr7 6347610 6351997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0598 120 400 Receptor kinase-like Gene Family AT1G79620 45.614 1.45e-70 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Gso7g0598 Pkinase 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0598 - - gmx:100792034 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0598 7 6347610 6351997 Gso16g0283 16 3206761 3211371 GST