Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0591 ATGGGTTTTCCGGTCGGTTACGTGGAGGTGTTCTTCCCGAACCCGTTCCTGCACACGCTGGCCCTCCTCGGCCTCCTCCGAAACCTCGTATTCTTCCTCTTCCACCTCCTCGGACTCTCCGACTTCTTCGAAACCGAGGTCGCTTGGCCGGACCCCCGCCCCTCAGACACGGCGGAGGCACGCCCCCCCTCCGTGTCGGCGCTCCTGATCCGGGACCTTCTGCCCGTCGCCAAGTTCGGAGACTCCGACATTGCCGCCCGACAAAACGGCTGCGCCTGCGCGGTTTGCCTGTTCGAGTTCTCCGAGGAGGAGGAGATTCGGTGCATGCGCAACTGCAAGCACATTTTCCACCGTACCTGCGTGGACCGTTGGATCGACCACGATCAGAAAACTTGCCCTCTCTGTAGGACCCCCTTTGTGCCAGATGATATGCTTGATGATTATAATCAACGCCTCTGGGCTGCTTCTGGGGTTAACGAGTTTTACACCGATTACACTTCTTCTTTCTGA 510 0.5863 MGFPVGYVEVFFPNPFLHTLALLGLLRNLVFFLFHLLGLSDFFETEVAWPDPRPSDTAEARPPSVSALLIRDLLPVAKFGDSDIAARQNGCACAVCLFEFSEEEEIRCMRNCKHIFHRTCVDRWIDHDQKTCPLCRTPFVPDDMLDDYNQRLWAASGVNEFYTDYTSSF* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0591 169 ProSiteProfiles Zinc finger RING-type profile. 93 136 IPR001841 -
Gso7g0591 169 PANTHER BRH1 RING FINGER PROTEIN 1 165 - -
Gso7g0591 169 SUPERFAMILY RING/U-box 92 143 - -
Gso7g0591 169 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 165 - -
Gso7g0591 169 SMART ring_2 93 135 IPR001841 -
Gso7g0591 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 56 141 IPR013083 -
Gso7g0591 169 Pfam Ring finger domain 92 136 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0591 Gso-Chr7 6266251 6267042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0591 1 168 C3H Transcription Factor Family AT1G63840 46.821 6.50e-50 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0591 K16281 - gmx:100790975 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0591 7 6266251 6267042 Gso16g0279 16 3147852 3148576 GST
Gso18g1949 18 51998363 51999171 Gso7g0591 7 6266251 6267042 PCT
Gso9g2118 9 45472893 45473695 Gso7g0591 7 6266251 6267042 PCT
Gso7g0591 7 6266251 6267042 Gso18g1949 18 51998363 51999171 PCT
Gso7g0591 7 6266251 6267042 Gso9g2118 9 45472893 45473695 PCT