Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0588 ATGGCAGCTGTTAGGTCTTCCTCTGTAAGAAGGTTAGGAAGCACAATTCAGGGTTCTTTTAATATGGAATTAGTTCAACACTGTCACTATCACCATAGTATGTGTATGAATCTTGCAAGGTTGCCAAGTGATTCACTGAGTCATCCTTATTACAAAAGAGAGTTACAGTTTGCTAAGAATCGGTTTAGTAATTTGGCCTCTGAATCCCTTGGAAGTAGTCATCACTTTGGCACTAGAGCCAGTGTATCGGTAAAACCAACATTCTCTGGTTATTGTTTTCGTAGTGCCCTTCCTTTTGCTTCCATGAGCCACGTGTTGAATCATCGAATGTATTCGTCGTCAGTGGGTGACAAAGGAAGTAGAGATGGTGGTACAGAAGTTTCTGCTGGTTCTGGTGCAACTGATATTAATACCACTGGTGATTCTGTTGTTGGGGGTGATTGGGCTGAGAGGATTAAAGATGCCTGGAAGAGTGTGGCAGAGGCAGCATCATATGCAGGGGGTAAGGTCAAAGAAACTTCTGATGATCTCACTCCATTTGCTCAACAGTTGCTTGATTCACACCCATATCTTGATAAGGTGGTTATTCCAGTTGCTGGTACTTTAACTGCTACCATATTAGCTTGGTTCTTGCTGCCTAGGATTTTGAGGAAATTTCACAAATATGCAACGCAAGGTCCTGTTTCTCTATTGCCAGCAAGCGTGTCTGTGGAGCCAGTTCCTTATGAGAAAAGCTTTTGGGGTGCTATGGAGGATCCAGTGCGATATTTAGTTACCTTCATTGCATTCTCACAAATTGGTGTTATGGTGGCTCCAACAACTATAACCTCACAATATCTTGCACCTGTTTGGAGGGGTGCAGTGATAGTTTCATTTGTATGGTTTTTGCATAGATGGAAAACAAATATTTTTGCACGGACGTTGTCCAGTCAAAGTTTACTTGGGCTTGATAAGGAGAAAGTGCTTGCTCTAGACAAAATCTCATCTATTGGTCTATTTGTGATTGGTATAATGGCTTTGGCTGAGGCTTGTGGTGTGGCCGTGCAATCTGTTGTGACCGTTGGTGGTATAGGAGGTGTGGCTACTGCTTTTGCTGCCAAGGACATTCTTGGCAATGTGTTCAGTGGTTTATCTATGCAGTTTTCAAAGCCCTTTTCAATTGGAGATACAATAAAAGCTGGCTCAATAGAGGGTCAAGTGGTGGAAATGGGTCTTACTTCCACATCATTGCTGAGTTCGGAGAAGTTCCCAGTCATTGTGCCAAACTCATTTTTTTCTAGTCAGGTTATTGTGAACAAGTCCCGTGCTGAATATCTTGCCATTATTACCAAAATTCCACTGCAAACTGAGGATTTAAGTAAGATTCCCCAGATATCAGATGATGTGAAAAGCATGCTCAGATCAAATGCAAAGGTTTTCTTAGGGAAAGATGTTCCCTACTGTTTCTTATCCCGTATAGAAAGTTCATATGCAGAATTGACTCTTGGATACAACCTCAAACATATGCGCAAAGATGAATTATACTCCGCAGAACAAGATATTCTCCTACAGGCAGTTCAAATCATTAAGAATCATGGGGTTGCTCTTGGCAGCACATGGCAAGACACGTCTTCTAAATGA 1620 0.4185 MAAVRSSSVRRLGSTIQGSFNMELVQHCHYHHSMCMNLARLPSDSLSHPYYKRELQFAKNRFSNLASESLGSSHHFGTRASVSVKPTFSGYCFRSALPFASMSHVLNHRMYSSSVGDKGSRDGGTEVSAGSGATDINTTGDSVVGGDWAERIKDAWKSVAEAASYAGGKVKETSDDLTPFAQQLLDSHPYLDKVVIPVAGTLTATILAWFLLPRILRKFHKYATQGPVSLLPASVSVEPVPYEKSFWGAMEDPVRYLVTFIAFSQIGVMVAPTTITSQYLAPVWRGAVIVSFVWFLHRWKTNIFARTLSSQSLLGLDKEKVLALDKISSIGLFVIGIMALAEACGVAVQSVVTVGGIGGVATAFAAKDILGNVFSGLSMQFSKPFSIGDTIKAGSIEGQVVEMGLTSTSLLSSEKFPVIVPNSFFSSQVIVNKSRAEYLAIITKIPLQTEDLSKIPQISDDVKSMLRSNAKVFLGKDVPYCFLSRIESSYAELTLGYNLKHMRKDELYSAEQDILLQAVQIIKNHGVALGSTWQDTSSK* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0588 539 Pfam Mechanosensitive ion channel 326 528 IPR006685 GO:0016020|GO:0055085
Gso7g0588 539 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 83 535 - -
Gso7g0588 539 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 281 367 IPR011014 GO:0016020
Gso7g0588 539 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 1, MITOCHONDRIAL-RELATED 83 535 - -
Gso7g0588 539 Gene3D - 384 432 IPR023408 -
Gso7g0588 539 Gene3D - 279 383 - -
Gso7g0588 539 SUPERFAMILY Sm-like ribonucleoproteins 368 433 IPR010920 -
Gso7g0588 539 MobiDBLite consensus disorder prediction 114 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0588 Gso-Chr7 6212225 6216616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0588 96 537 Mechanosensitive Ion Channel Family AT4G00290 60.633 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0588 K22047 - gmx:100789047 1042.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0588 7 6212225 6216616 Gso16g0273 16 3097086 3102443 GST