Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0574 ATGGTGTCGGTGAACCCAAGCCCTGCTCAAGGCTTCTACTTCTTCGATCCCTCCAACATGGCCCTTCCCGGCGTCAACAATCTTCCACCGCCCCCGCCGCCTGCTCCGCCTTCTCACGCCGCCGTGGAGGATCCGAGTAAGAAGATCAGGAAACCCTACACGATTACCAAGTCCAGGGAGAGCTGGACTGAGCAGGAGCACGACAAGTTTCTAGAAGCTCTCCAATTATTTGATCGGGACTGGAAAAAGATTGAAGCATTTGTTGGTTCAAAAACAGTTATCCAGATACGAAGTCATGCACAGAAGTATTTTCTTAAAGTTCAGAAGAAGGGAACAAGTGAACATGTACCTCCTCCCCGGCCAAAGAGAAAAGCTGCTCGCCCATACCCTCAAAAAGCTCCTAAAACTCCTACTGTATCTCAAGTTATGGGCCCATTGCAATCTTCATCTTCTTTCATTGAACCTGCATACATTTATATCCCGGATTCTTCATCTGCGCTTGGAACTCCAGTTACTAACATGCCTTCGTCATCTTGGAACTATAATAATACACCACAACCTGTCAATGTGCCACAAGTGACCAGAGATGACATGGGATTCACTGTAGCTGGACAAACTGCTCCTCTTAATTGTTGCTGCAGCAGTAGTAATGAGAGCAACCCTCCAACTTGGCCAAGTAGCAAAAGGATTAATCAAGGTGACCAGGAGCCAATTAAAGTAATGCCAGATTTTGCACAAGTCTACAGCTTCATCGGCAGTGTATTCGATCCAAATTCAACTAATCACCTACAGAAACTACGACAGATGGATCCATTAAATGTGGAAACGATATTGTTGTTGATGAGAAATCTCTCCATCAATTTAATGAGTCCTGAATTTGAGGATCATAAGAGGATGCTTTCATCATATGACACCGACTCTGACAAGTCGAAGTTGGTTAATATTTGCAGCAAATCCCTCACTAATAAATCTGAGAGTGCTGTTTTGTCTGCTTAG 996 0.4468 MVSVNPSPAQGFYFFDPSNMALPGVNNLPPPPPPAPPSHAAVEDPSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKKGTSEHVPPPRPKRKAARPYPQKAPKTPTVSQVMGPLQSSSSFIEPAYIYIPDSSSALGTPVTNMPSSSWNYNNTPQPVNVPQVTRDDMGFTVAGQTAPLNCCCSSSNESNPPTWPSSKRINQGDQEPIKVMPDFAQVYSFIGSVFDPNSTNHLQKLRQMDPLNVETILLLMRNLSINLMSPEFEDHKRMLSSYDTDSDKSKLVNICSKSLTNKSESAVLSA* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0574 331 Pfam Myb-like DNA-binding domain 59 104 IPR001005 -
Gso7g0574 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Gso7g0574 331 MobiDBLite consensus disorder prediction 24 40 - -
Gso7g0574 331 Gene3D - 62 109 - -
Gso7g0574 331 CDD SANT 61 104 IPR001005 -
Gso7g0574 331 PANTHER SWI/SNF COMPLEX-RELATED 2 326 - -
Gso7g0574 331 SUPERFAMILY Homeodomain-like 53 109 IPR009057 -
Gso7g0574 331 MobiDBLite consensus disorder prediction 108 144 - -
Gso7g0574 331 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Gso7g0574 331 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 57 106 IPR006447 GO:0003677
Gso7g0574 331 PANTHER MYB TRANSCRIPTION FACTOR 2 326 - -
Gso7g0574 331 ProSiteProfiles SANT domain profile. 57 108 IPR017884 -
Gso7g0574 331 SMART sant 58 106 IPR001005 -
Gso7g0574 331 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0574 Gso-Chr7 6091822 6098106 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso7g0574 Myb_DNA-binding 2.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0574 - - gmx:778164 630.557