Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0559 ATGGAGGCTGTGTCATCCGCACTACTAGAGCCAGTAACTAATTCTGTGTTGGATCTGCTTAAAAAGCAAGTGGATTACATCCGTTACAGGCGAAACTTTGATGAAGTAGACGAGTGTGTTAAGCAACTTAAACTTGAAAAGGCGAGAGTAGATCATCAATGTGACGAAGCTGTCAAAAATGGACACAAAATTGAAGGTAAGGCTAGAGAATGGTTAGGGAAAGTGGGTAAATTTGAGACAGAAGTGGAGAAGTATTGGAACGATGATGGCCACAAAAAGACACGGTTTTCCAATTGTTTATTTCCTTACTTTAGGCATAGACTAGGCAGACTAGCAAAGAAGATGGCAGTTGAGGGTAAAAAGATAACCGACGATTGCCCCAAGTCTGCTGAAATTGCCTATCGGGTAAACGTAACATCTAATGATGCCATTTTGTCTAATACTGACCTTATGGATTTTGGTTCTAGAAAATCCATAATGGAACAAATAATGGCAACACTTGAAGATCCCACTGTGAAAATGATTGGAGTGCATGGGCCAGGTGGGGTGGGTAAGAGCACTTTAATCAAAGCAATTGCTGAAATTGCTCGCGACAAGAAGTTGTTTAATGTGGTGGCTTTTTCAGAAATAACAGTCAACCCCAATCTGAAAAAAGTCCAGGAAGATATTGCTTACGTGTTGGGATTGAGATTGGAAGGAGAAGGTGAGAATGTAAGAGCTGATCATCTACGGAGGAGGTTAAAGAAAGAGAAGGAGAACACCCTCATAATCTTGGATGACCTTTGGGACAGATTAGACTTGAATAGGATGGGGATTCCACTTGATGGTGATGTTGATGATAATGATAAACAGGGTCTCAAAGGACCGACAAAAGAAAAATCTCTTGGTGATTATAAGGGCTGCAAAATTTTGCTAACTTCAAGGAATAAAAACGTATTAACTGATAAAATGGAAGTTAAGTCAACTTTCTGTGTAGAGGAATTAGATGAAAAGGATGCTCTGAAGTTGTTTCGGAAGGAGGCTAGAATACAGGGTGAAATGTCCCAGTGGAAACAAGAAATTGTTAAGAAGTACTGTGCTGGGTTACCTATGGCAATAGTTACAGTTGGAAGGGCATTAAGAGACAAGAGCGACTCAGAGTGGGAAAAACTTAAAAAGCAAGACCTGGTGGGAATTCAGAATTCTATGGAGATTTCTGTAAAAATGAGTTATGACCGTCTAGAAAATGAGGAGCTTAAATCCATTTTCTTTCTTTGTGCTCAAATGGGTCATCAACCCCTAATTATGGACTTGGTGAAGTATTGCTTTGGTTTGGGAATACTTGAAGGGGTCTACTCGCTTGGGGAAGCTCGGGGCAGAATATCTACATCAATCCAAAAGTTGAAAAACTCAGGTTTAGTGTTGGATGGAAGTTCTAGTATTCATTTCAATATGCATGATCTGGTTCGAGATGCTGCTTTATCTATAGCACAGAAGGAGCAAAATGTATTTACTTTGAGAAATGGGAAACTTGATGATTGGCCTGAACTCGAGAAGTGCACTTCTATTTCTATATGCAACAGTGATATCATTGATGAGCTTCCAGAAGAAATAAATTGTCCTCAACTTAAATTTTTCCAAATTGACAGTGATGATTCATCTTTAAAAATACCTAACAGTTTTTTTAAAGGAATGAAAAAGCTCAAAGTATTAATGTTGACTGGTATTCAACTATCAAGCTTACCATCTTCAATTGAAAGCCTATCAGACCTCAGATTGCTTTATTTGGAGAGATGCACCTTAGATCACAACTTATCAATCATAGGGAAGCTAAAAAAATTAAGAATTCTCAGCCTTTCTGGATCTCGAATTGAAAATTTGCCAACTGAGTTAAAGGACTTGGATAAACTACAATTACTAGACATCAGCAATTGTTCAATAGTCACCATGATTCCACCTAATCTTGTATCAAGGTTGACTTTGTTGGAAGAGCTGTATGTAAGAAAGTGCTTCATGGAAGTGTCGGAGGAAGGAGAGAGAAACCAAAGTCAAATTTCATTTATTTCTGAACTAAAGCATTTGCATCAATTGCAAGTGGTGGACTTAAGCATTCCATGTGCTGAAGTTTTTCCCAAGGAATTGTTCTTTGACAACTTAAGTGATTACAAGATTGAGATTGGGAACTTCAAAACGCTTTCAGCTGGAGATTTCAGAATGCCTAATAAGTATGAAAAGTTCAAGTCTTTGGCATTGGAGCTGAAGGATGACACTGACAATATTCACTCTCAGAAAGGAATAAAGTTGTTGTTTAAAAGAGTTGAAAATTTGTTGTTGGGAGAGCTGAATGGTGTTCAAGATGTTATTAATGAGTTGAATTTGGATGGATTTCCACATCTGAAACACTTATCCATCATAAACAACCCTAGCATCAAATATATCATCAACTCAAAGGATTTGTTTTATCCTCAGGATGTTTTTTCCAAGTTGGAATCTCTATGTCTCTACGAACTAAGAAAGATAGAGATGATATACTTTAGTTCAGGTACAGAGATTATATGCTTTAGTCCATTTACAGATTGCTCATTCACCAAATTAAAAACCATCAAGGTCAAGAAGTGTGACCAATTGAAGAATCTTTTCTCCTTTTGCATGGTAAAATTGCTTGCGAGTCTTGAAACAATTGGTGTTTCCAATTGTGGTTCTTTAGAGGAGATCATTAAAATACCTGACAATTCTGATAAGATTGAGTTTCTTAAGTTGATGTCTTTGTCACTTGAATCATTATCATCATTCACTAGTTTTTATACCACAGTAGAGGGGTCTTCTACAAACAGGGATCAGATACAAATTACTGTTACAGAGAATGAGCATAGTGAGATGGCTCCTCCTCTTTTTGGTGAACTGGTTGAAATACCAAACTTAGAGAACTTGAATTTAATCTCAATGAACAAGATCCAGAAGATATGGAGCGACCAGCCCCTGTCAAACTTCTGCTTTCAAAACTTAATAAAATTAGTTGTGGATGATTGTGATAATTTGAGATATTTGTGTTCAATGTCCGTGGCCAGCAGTTTGAGGAAACTGAAAGGCCTGTTTGTAAGCAAGTGTAAAATGATGGAGAAGATTTTTAGCACAGAAGGAAATAGTGCAGGCAAGGTCTGCGTCTTTCCTAAGTTGGAGGAAATCCATCTCGAAGGAATGGTTGAGTTAACAGACATATGGCAAGCTGAAGTGAGTGCTGATTCCTTTTCTAGTGTCACTTCTGTGAACATTGATAGTTGCAATAAACTAGACAAAATTTTTCCGAGTCACATGGAAGGATGGTTTGCGAGTTTGAACAGCTTGAAGGTTTATTATTGTCAGTCAGTGAAAGTGATTTTTGAAATCAAAGATTCTCAGCAAGCAGATGCATCTGGTGGGATAGACACAAATTTACAGGTTGTTGATGTATGTGGACTCCCAAAGTTGGAGCGGGTGTGGAGCAGGGATCCAGGAGGAATTCTTAACTTCAAAAAACTGCAGAGTATACATGTGTTTTCTTGTCATAGACTGAGGAATGTATTTCCAGCTTCTGTGGCTAAAGATGTTCCAAAGCTTGAAAATATGTCGGTCAGACGGTGTGATGGAATTGTGGAAATTGTTGCCTGTGAAGATGGATCCGAAACAAACACTGAACAATTAGTGTTTCCTGAACTAACCTACATGGACCTATATGAGCTATCAAGCATCCAACATTTCTACAGGGGGAGACATCCTATAGAGTGTCCAAAATTGAAGAAGTTGTCAGTAGGGAAATGTAACGAGAAGCTAAAAACATTCGGAACCGGAGAAAGGAGCAATGAAGAAGATGAAGCAGTTATGTCAGCTGAAAAGATATTCCCCAATTTGGAGTTTTTGGATATTGACTTTGACGAAGCACAGAAGTGGTTATTGAGCAACACTGTGAAGCATCCAATGCACCGTTTAAAAGGGCTTAGGTTAAGTGAAGTTAATGATGGTGAACGTCTCTGTCAGATTCTGTACAGAATGCCAAATCTAGAAAAGTTACACTTGTGGTACGCTGAACATTTGCTTAAAGAGTCGTCCGAGTCACGTTTGGGAACCGTATTACAGCTGAAGGAATTGTTTTTGATTTCGTCAGAGATAAAGGATATAGGATTTGAACGAGAACCAGTTCTACAGAGACTAGAGCTTTTGAGCTTATATTGGTGCCACAAATTGAGGAATTTGGCTCCTCCCTCGGTATCATTGGCTTACTTGACAAATTTGGAAGTAGTGCAATGTGTAGGATTAAGGAATTTAATGGCATCCTCAACGGCAAAAAGCTTGGTTCAACTTAAGTCCATGAAGATAAACGGATGTCATGAATTAGAGGAAATAGTAAGCAATGAGGGAAATGAAGAAGCAGAGCAAATAGTGTTTGGCAAATTGATTACTATAGAACTTGAGGGGCTAATAAAGCTGAAAAGTTTTTGCAGTTACAAGAACTATGAATTCAAATTCCCGTCATTGGAAGTATTGATTGTGAGATATTGCGGAATGATGGAAAGATTCGCGGAGGGTGGCGCAAGAGCAGCAAAGTTAGAAAACATAGTTAGTGCTAATGAAGAAGGAAAAGAGGAAGCCAAATGGCAGTGGGAAGGAGACTTGAATGCCACCATACAAAAAGTTTGGGAAGATAAGTTTTTGGAGTCTGCAAGTACTGAATCATATCTTAGTCTCAGAGATAGCCCACTACAAGTGATATGGCTTGACTCACGGCGGATCCCAAAGTGGTGCTTCAGTAACTTGAAGTCTTTGACTGTGGACGGATGCCAATTTTTAACAGATGTTGTCATACCCTTCTATTTACTTCCTTTCTTAACTAATTTGGAAAAATTAAAAGTCCGAAAGTGTGGTTCTGTGAAAAGCATATTTGACGTGAAAACAGCTATGGGATTGGGAGCAGCAGCCTTCCCTAGACCTCTCCCTTTTCCCTCAAGAAATTGA 4968 0.3853 MEAVSSALLEPVTNSVLDLLKKQVDYIRYRRNFDEVDECVKQLKLEKARVDHQCDEAVKNGHKIEGKAREWLGKVGKFETEVEKYWNDDGHKKTRFSNCLFPYFRHRLGRLAKKMAVEGKKITDDCPKSAEIAYRVNVTSNDAILSNTDLMDFGSRKSIMEQIMATLEDPTVKMIGVHGPGGVGKSTLIKAIAEIARDKKLFNVVAFSEITVNPNLKKVQEDIAYVLGLRLEGEGENVRADHLRRRLKKEKENTLIILDDLWDRLDLNRMGIPLDGDVDDNDKQGLKGPTKEKSLGDYKGCKILLTSRNKNVLTDKMEVKSTFCVEELDEKDALKLFRKEARIQGEMSQWKQEIVKKYCAGLPMAIVTVGRALRDKSDSEWEKLKKQDLVGIQNSMEISVKMSYDRLENEELKSIFFLCAQMGHQPLIMDLVKYCFGLGILEGVYSLGEARGRISTSIQKLKNSGLVLDGSSSIHFNMHDLVRDAALSIAQKEQNVFTLRNGKLDDWPELEKCTSISICNSDIIDELPEEINCPQLKFFQIDSDDSSLKIPNSFFKGMKKLKVLMLTGIQLSSLPSSIESLSDLRLLYLERCTLDHNLSIIGKLKKLRILSLSGSRIENLPTELKDLDKLQLLDISNCSIVTMIPPNLVSRLTLLEELYVRKCFMEVSEEGERNQSQISFISELKHLHQLQVVDLSIPCAEVFPKELFFDNLSDYKIEIGNFKTLSAGDFRMPNKYEKFKSLALELKDDTDNIHSQKGIKLLFKRVENLLLGELNGVQDVINELNLDGFPHLKHLSIINNPSIKYIINSKDLFYPQDVFSKLESLCLYELRKIEMIYFSSGTEIICFSPFTDCSFTKLKTIKVKKCDQLKNLFSFCMVKLLASLETIGVSNCGSLEEIIKIPDNSDKIEFLKLMSLSLESLSSFTSFYTTVEGSSTNRDQIQITVTENEHSEMAPPLFGELVEIPNLENLNLISMNKIQKIWSDQPLSNFCFQNLIKLVVDDCDNLRYLCSMSVASSLRKLKGLFVSKCKMMEKIFSTEGNSAGKVCVFPKLEEIHLEGMVELTDIWQAEVSADSFSSVTSVNIDSCNKLDKIFPSHMEGWFASLNSLKVYYCQSVKVIFEIKDSQQADASGGIDTNLQVVDVCGLPKLERVWSRDPGGILNFKKLQSIHVFSCHRLRNVFPASVAKDVPKLENMSVRRCDGIVEIVACEDGSETNTEQLVFPELTYMDLYELSSIQHFYRGRHPIECPKLKKLSVGKCNEKLKTFGTGERSNEEDEAVMSAEKIFPNLEFLDIDFDEAQKWLLSNTVKHPMHRLKGLRLSEVNDGERLCQILYRMPNLEKLHLWYAEHLLKESSESRLGTVLQLKELFLISSEIKDIGFEREPVLQRLELLSLYWCHKLRNLAPPSVSLAYLTNLEVVQCVGLRNLMASSTAKSLVQLKSMKINGCHELEEIVSNEGNEEAEQIVFGKLITIELEGLIKLKSFCSYKNYEFKFPSLEVLIVRYCGMMERFAEGGARAAKLENIVSANEEGKEEAKWQWEGDLNATIQKVWEDKFLESASTESYLSLRDSPLQVIWLDSRRIPKWCFSNLKSLTVDGCQFLTDVVIPFYLLPFLTNLEKLKVRKCGSVKSIFDVKTAMGLGAAAFPRPLPFPSRN* 1656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0559 1655 PRINTS Disease resistance protein signature 174 189 - -
Gso7g0559 1655 PRINTS Disease resistance protein signature 248 262 - -
Gso7g0559 1655 PRINTS Disease resistance protein signature 359 373 - -
Gso7g0559 1655 PRINTS Disease resistance protein signature 625 641 - -
Gso7g0559 1655 SUPERFAMILY RNI-like 1141 1454 - -
Gso7g0559 1655 PANTHER - 1163 1284 - -
Gso7g0559 1655 PANTHER - 1048 1131 - -
Gso7g0559 1655 PANTHER - 1384 1546 - -
Gso7g0559 1655 PANTHER - 27 1040 - -
Gso7g0559 1655 Gene3D - 327 408 IPR042197 -
Gso7g0559 1655 Coils Coil 40 60 - -
Gso7g0559 1655 PANTHER RPP4C3 1384 1546 - -
Gso7g0559 1655 PANTHER RPP4C3 1048 1131 - -
Gso7g0559 1655 PANTHER RPP4C3 1163 1284 - -
Gso7g0559 1655 PANTHER RPP4C3 27 1040 - -
Gso7g0559 1655 SUPERFAMILY L domain-like 478 923 - -
Gso7g0559 1655 ProSiteProfiles Leucine-rich repeat profile. 966 988 IPR001611 GO:0005515
Gso7g0559 1655 SUPERFAMILY L domain-like 946 1114 - -
Gso7g0559 1655 Gene3D Ribonuclease Inhibitor 1279 1638 IPR032675 -
Gso7g0559 1655 SMART AAA_5 171 333 IPR003593 -
Gso7g0559 1655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 419 IPR027417 -
Gso7g0559 1655 SUPERFAMILY RNI-like 1410 1628 - -
Gso7g0559 1655 Pfam NB-ARC domain 299 387 IPR002182 GO:0043531
Gso7g0559 1655 Pfam NB-ARC domain 158 275 IPR002182 GO:0043531
Gso7g0559 1655 Gene3D - 139 325 IPR027417 -
Gso7g0559 1655 Gene3D Ribonuclease Inhibitor 511 933 IPR032675 -
Gso7g0559 1655 Gene3D Ribonuclease Inhibitor 1043 1128 IPR032675 -
Gso7g0559 1655 Gene3D Ribonuclease Inhibitor 942 1042 IPR032675 -
Gso7g0559 1655 Gene3D Ribonuclease Inhibitor 1129 1277 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0559 Gso-Chr7 5715023 5729000 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0559 172 648 WRKY Transcription Factor Family AT5G45050 24.819 1.06e-08 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0559 - - gsj:114418380 3250.69