Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0556 ATGGAGTCTGTGTTGTCCCCGATAGTGGAACGAACGTTTAATTTTGCGGTGGACCCCATTATTCGGCAGTTGGCCTACATCCTCCGTTGCAGGAAAAACGTTGATGAACTCTTGACTAGTTTTAAGAATCTTGAACTTGAAAAAGAGTCCATAGATAGTCGATGTGACCAAGCTGAGAATAATTTACAAAACATTGAAGCCAAAGTCAAAGAATGGTCAAGGAAAGTAGATGAGTTCAAGACAGAAGTAGAGAAGTTTAGGAACGATGAAGGCCACAGAAAGACAGGGTTGTCCAATGTTTTATTTTTATTTCCTTACTTTTGGAATAGGCATAGACTTGGCAGACAAGCTAAGAAGATGGCAGAGATTGTTAAGAATCTAATAGATGAGTCTGCCAAGTTCAATGAAGTTTCCTACACAGACAACTTAACATCTAATGATTTCACTTTGTCTAATCCGGGCTACATGCGATTTGCTTCTAGAGATTCTACGGTGGAAAAAATAATTGCAAAACTTGAAGATTCCTCTGTAAGAATGATTGGGCTGCATGGGGGTGGTGGCATGGGTAAGACCACTTTAATCAAAGCAATTGCTAAGAAAGCTATGGAGAAGAAGCTGTTTAATGTGGTGGCTATATCAGAAATCACAGCCAATCCTGATCCACAAAAAATCCAGGAAGACATTGCTTACGCGTTAGGATTGAGATTGGAAGGGGAAGGTGAGAATGCTAGAGCTCGTCGTCTGATGACGAGGTTAAAGCAAGAGAAGGAGAACACCCTTATAATCTTGGATGACCTTTGGGACAGATTAGACTTGAATAAGATAGGGATTCCACTTGATGGTGATGTTGATGATAATGATTTAAACACAAAGACAAGCAATGCTAAACAAGGTCCCAAAGAGGCGACTAAAGAAAAATCTCTTGGTGATTATAAGGGCTGCAAAATTTTGCTAACTTCAAGGGATAAAAACGTATTAACTGATAAAATGGAAGTTAAGTCAACTTTCTGTGTAGAGGAATTAGATGACGATGATGCTCTGAGGTTGTTTCGGAAGGAGGCTAGAATACAGGGTGAAATGTCCCAGTGGAAACAAGAAATTGTTAAGAAGTACTGTGCAGGGTTACCTATGGCTATAGTTACAGTTGGAAGGGCATTAAGAGACAAGAGCGACTCAGAGTGGGAAAAACTTAAAAACCAAGACCTGGTGGGAATTCAGAATTCTATGGAGATTTCTGTAAAAATGAGTTATGACCGTCTAGAAAATGAGGAGCTCAAGTCCATTTTCTTTCTTTGTGCGCAAATGGGTCATCAACCCCTAATTATGGACTTGGTGAAGTATTGTTTTGGTTTGGGAATACTTGAAGGGGTCTACTCGCTTGGGGAAGCTCGGGGCAGAATATCTACATCAATCCAAAAGTTGAAAAACTCAGGTTTAGTGTTGGATGGAAGTTCTAGTATTCATTTCAATATGCATGATCTTGTTCGAGATGGAGCTTTATCTATAGCACAGAAGGAGCAAAATGTATTTACTTTGAGAAATGGAAAACTTGATAATTGGCCTGAACTCGAGAGGTGTACTTCTATTTCTATATGCAACAGTGATATCATTGATGAGCTTCCAGAAGAAATAAATTGTCCTCAACTTAAATTTTTCCAAATTGACAGCGATGATTCATCTTTAAAAATACCTGACAGTTTTTTTAAAGGAATGAAAAAGCTCAAAGTATTAATGTTGACTGGTATTCAACTATCAAGCTTACCATCTTCAATTGAAAGCCTATCAGACCTCAGATTGCTTTGTTTGGAGAGATGCACCTTAGATCACAACTTATCCATCATAGGGAAGCTGAAAAAATTAAGAATTCTCAGCTTTTCTGGATCTCGAATTGAAAATTTGCCAATTGGGTTAAAGGACTTGGATAAACTACAATTACTAGACATCAGCAATTGTTCAATAGTCACCATGATTCCACCTAATCTTGTATCAAGGTTGACTTTGTTGGAAGAGTTGTATGTAAGAAATTGCTTCATGGAAGTGTCGGAGGAAGGAGAAAGAAACCAAAGTCAAATTTCATTTATTTCTGAACTAAAGCATTTGCATCAATTGCAAGTGGTGGACTTAACCATTCCATGTGCTGAAGTTTTTCCTAAGGAACTGTTCTTTGACAACTTGAGTGATTACAAGATTGAGATTGGGAACTTCAAAACGCTTTCAGCTGGAGATTTCAGAATGCCTAATAAGTATGAAAAGTTCAAATCTTTGGCATTGGAGCTGAAGGATGACACTGACAATATTCACTCTCAGAAAGGAATAAAGTTGTTATTTAAAAGAGTTGAAAATTTGTTGTTGGGAGAGCTAAATGGTGTTCAAGATGCTATTAATGAGTTGAATTTGGATGGATTTCCACATCTGAAACACTTATCCATCGTAAACAACCCTAGCATCAAATATATCATCAACTCAAAGGATTTGTTTTATCCTCAGGATGTTTTTCCCAAGTTGGAATCTCTATGCCTCTACGAACTAAGAAAGATAGAGATGATATACTTTAGTTCAGGTACAGAGATGATACGCTCTAGTCCATTTACAGATTGCTCATTCACCAAATTGAAAACCATCAAGGTCGAGAAGTGTGAGCAATTGAAGAATCTTTTCTCCTTTTGCATGGTTAAATTGCTTGCCAGTCTTGAAACAATTGGTGTTTCCAATTGTGGTTCTTTAGAGGAGATCATTAAAATACCTGACAATTCTGATAAGATTGATTTTCTTAAGTTGAAGTCTTTGTCACTTGAATCATTATCATCATTCACTAGTTTTTACACCACAATAGAGGGGTCTTCTACAAACAGGGATCAAATGCAAACTACTGTTATGGCTCATCCTCTTTTTGGTGAACTGGTTGAAATACCAAACTTAGAGAACTTGAATTTAATCTCAATGAACAAGATCCAGAAGATATGGAGCGACCAGCCCCCGTCAAACTTCTGCTTTCAAAACTTAATAAAATTAGTTGTGAAAGATTGTCATAATTTGATATATTTGTGTTCATTGTCCATGGCCAGCAGCTTGAGGAAACTGAAAGGCCTTTTTGTAAGCAATTGTAAAATGGAGAAGATTTTCAGCACAGAAGGAAATAGTGCAGACAAGGTCTGCGTCTTTCCTAAGTTGGAGGAAATCCAACTCGACCAAATGGATAAGTTAACTGACATATGGCAAGCTGAAGTGAGTGTTGATTCCTTTTCTAGTCTCACTTCTGTGTACATTTATAGTTGCAATAAACTAGACAAAATTTTTCCGAGTCACATGGAAGGATGGTTTGCAAGTTTGAACAGCTTGAAGGTTCATTCTTGTCAGTCAGTTAAAGTGATTTTTGAAATCAAAGATTCTCAGCAAGTAGATGCATCTGGTGGGATAGACACAAATTTGCAAGTTGTTGATGTAAGGGGACTCCCAAAGTTGGAGCAGGTGTGGAGCAGGGATCCAGGAGGAATTCTTAACTTCAAAAAACTTCAGAGTATACAAGTGTCCTCTTGTGAAAGACTGAGGAATGTATTTCCAGCTTCTGTGGCCAAAGATGTTCCAAAGCTTGAATACATGTCGGTAGGAAGTTGTGATGGAATTGTGGAAATTGTTGCCTGTGAAGATGGATCCGAAACAAACACTGAACAATTAGTGTTTCCTGAACTAACCTACATGGATTTAGGTTACCTATCAAGCATCCAACATTTCTACAGGCGGAGACATACTATAGAGTGTCCAAAATTGAAGAAGTTGGTAGTAAAGGAATGTAACAAGAAGCTAAAAACATTCCAAACAGGAGAAAGCAACAATGAAGAAGATGAAGCAGTTTTTTCAGCTGAAAAGATATTCCCCAACTTGGAGTGTTTGCATATCGACTTTGACGAAGCACAGAAGTGGTTATTGGGCAACACTGTGAAGCATCGAACGCACCGTTTAAAAGAGCTTTGGTTGAGGAATGTTAATGATGGTGAACGTCTCTGTCAGATTCTGTACAGAATGCCAAATCTAGAAAAGTTATACTTGTGGGACGCTGAACATTTGCTTAAAGAGTCGTCCGAGTCACGTTTGGGAACCGTATTACAGCTGAAAGAATTGGTTTTGTGGGAGTCAGAGATAAAGGATATAGGATTTGAACGAGAACCAGTTCTACAGAGGCTAGAGCTTTTGAGCTTATTTGGGTGCGACAAATTGAGGAATTTGGCTCCTCCCTCGGTATCATTGGCTTACTTGACAAATTTGAAAGTAGAGTATTGTGGTAGATTAAGGAATTTAATGGCATCCTCAACGGCAAAAAGCTTGGTTCAACTTAAGTCCATGAAGATAAGGCAATGTGATGAATTAGAGGAAATAGTAAGCAATGAGGGAAATGAAGAAGAAGAGCAAATAGTGTTTGGCAAATTGATTACTGTAGAACTTGAGGGGCTAAGAAAGCTGAAAAGTTTTTGCAGGTACAAGAACTGTGAATTCAAATTCCCGTCATTGAAAGTATTAACAGTGAAAGAATGCCGAATGATGGAAACATTCACGGAGGGTGGCGCAAGAGCACCAAAGTTACAAAACATAGTTACTGATGACAATGAAGAAGGAAAAGAGGAAGCCAAATGGCAGTGGGAAGGAGACTTGAATGCCGTCTTGGAGTCTGCAAGTACTGTATCATCTCTTAGCCTCAGAGACAGCCCACCACTACAAGTGATATGGCGTGGCTCACGGCCGATCACAAAGTGGTGCTTCAGTAAGTTGAAGTATTTGACTGTGGACGGATGCCAATTTTTAACAGATGTTGTCATACCCTTCTATTTACTTCCTTTCTTAACTCATTTGCAACAATTACAAGTCTCCCACTGTGGTTCTGTGAAAAGCATATTTGATATAACACAAGAAAGAGAAATCACAACTATGGGATTGGGAGCAGCAGCCTTCCCTAGACCTCTCCCTTTTTCCCTCAAGAAATTGACTTTAGAGAGGCTGCCAAAACTGGAGAATGTCTGGAATGAAGATCCTCATGGAATTCTAACCATGCAACTTCTACAACATGTTATTGTTGCAGAGGATAATGCAGATCCAAGAGGAGCAAATCTAGAGCTTACGTTCCCGTGTCCCTGTGTGAGGTCATTGAAACTACAAGATTTGCCCAAGTTCAAGTATTTTTACTACTGCTCAATGCAGTGTGACATTTTCCAGACACCTACCGAGGATGAAAAGCCGACATCCAACTTACAGTGCCTGTTACTCGGTGAAAAAGGACTGGAGATGATCAAGCGTGGAGAATTTCAGACAAACTTCTTACACAAGTTACAAGTTCTTACTCTGTGCTTTCATATTGGGTCGAATGTATTTCCATATGAAATTCTACAACTGGCGCCCAATATAGAGAAGCTTGTGGTGTGTGATGGTTCCTTCAAGGAGATTTTCTGCTTTGATAGTCTTAATGTGGATGAGGCTGGACTCCTATTACAGCTCAAAGTCTTATGCTTGGAGTCCCTTCCAGAGCTTGTTTCCATTGGGTTAGAGAACTCTTGGATTCAGCCCTTACTGGGAAATCTAGAAACCTTGGAAGTAATACGTTGTTCTAGTTTAAAAGACTTGGTACCATCTACAGTGTCTTTCTCCAATCTGACATATTTGGAAGTAGAAAGATGCAATAGCATGCTATATTTGTTCACATCCTCAACAGCAAGAAGTTTGGGTCAACTCAAAAGAATGGAGATAAAAATGTGTGATTCAATTGAAGAGATAGTAGTCTCTAAGGAGGGGGATGAATCACATGAGGATGAAATAATATTTCCGCAGCTCAATTGTTTGAAACTTGAAGAATTACGAAAGCTGAGAAGCTTCTATAAAGGAAGTTTATTAAGTTTCCCATCATTGGAGGAATTGTCAGTAATCTCTTGCGAGTGGATGGAAACATTATGTCCAGGTACCCTAAAAGCAGACAAGTTGGTTCAAGTTCAACTTAACAGATACTCAGATGCTATCAAATTGGAAAATGACCTGAACTCTACCATGCGGGAGGCATTTGGGAAAAAGTTATGGCAGTCTGCACACTACAAGAGATATATTGACCTCAAAGATAGCTCACTACAAGAGATATGGCTTAGGCTTCACTCACTGCATATCCCCCCACACTTCTGCTTCAGATACTTATACACCTTGACTGTGGACGGCTGCCATTTTTTATCAGATGCGGTGTTACCCTTCTCTTTACTTCCTTTATTACCTAAATTGGAAACACTGAAAGTTCGAAACTGTGATTTTGTGAAAATCATATTTGATGTGACAACTATGGCAGCACTCCCTTTTGCCCTGAAGAATTTGATTTTAGAGCGGCTGCCAAATCTGGAGAATGTTTGGAATTCAAATGTTGAGCTTACGTTCCCCCAAGTCAAGTCATTGGCACTGTGTGATCTGCCAAAGTTAAAGTATGACATGTTGAAGCCATTTACACATCTACAACCACATGCTCTAAATCAACTCTGTATTCATAAGCTTACACCCAACATAGAGCACCTGACACTCGGTGAACATGAACTGAACATGATTTTGCGTGGAGAATTCCAGGGAAACCACTTAAACGAGTTAAAAGTTCTTGCTCTGTTCTTTCATATTGAATCCGATGTATTTCTACAACGGGTGCCCAATATAGAGAAGCTTGAGGTGTGTGATGGTTACTTCAAAGAGATTTTCTGCTTTGATAGTCTTAATGTGGATGAGGATGGATTGGTTTCACAGCTAAAAGTGATATGCTGGGACTCCCTTCCAGAGCTTGTTTCCATTGGGTCAGAGAACTCTGGGATTGTGCCCTTTCTCAGGAATCTAGAAACATTGCAAGTAATCAGCTGTTTCAGTTCAATAAATCTGGTACCATGCAAAGTGTCTTTCTCCAATCTGACATATTTGGAAGTAAACCGTTGCAAGAGTCTGCTATATTTGTTCACATCCTCAACAGCAAGAAGTTTGGGTCAACTCAAAACAATGAAGATAAAAATGTGTTATTCAATTGAAGAGATAGTCTCTAAGGAAGGAGATGAATCACATGAGAATGAGACAATATTTCAGCAGCTCAATTGTTTGAAACTTGAATATTTATTTAAGCTGAGAAGGTTCTACAAAGGGAGTTTAAGTTTCCCGTCCTTGGAGGAATTCACAGTAACGTATTGCGAGAGGATGGAAAGTTTTTGTACAGGTACGGTAAAAACAGACAAGCTGTTACAAGTGAATATTAATCACCGTGTTATCCCCTTGGAAACTGATCTCAACTCTGCCATGCAAAACCGATAG 7302 0.3902 MESVLSPIVERTFNFAVDPIIRQLAYILRCRKNVDELLTSFKNLELEKESIDSRCDQAENNLQNIEAKVKEWSRKVDEFKTEVEKFRNDEGHRKTGLSNVLFLFPYFWNRHRLGRQAKKMAEIVKNLIDESAKFNEVSYTDNLTSNDFTLSNPGYMRFASRDSTVEKIIAKLEDSSVRMIGLHGGGGMGKTTLIKAIAKKAMEKKLFNVVAISEITANPDPQKIQEDIAYALGLRLEGEGENARARRLMTRLKQEKENTLIILDDLWDRLDLNKIGIPLDGDVDDNDLNTKTSNAKQGPKEATKEKSLGDYKGCKILLTSRDKNVLTDKMEVKSTFCVEELDDDDALRLFRKEARIQGEMSQWKQEIVKKYCAGLPMAIVTVGRALRDKSDSEWEKLKNQDLVGIQNSMEISVKMSYDRLENEELKSIFFLCAQMGHQPLIMDLVKYCFGLGILEGVYSLGEARGRISTSIQKLKNSGLVLDGSSSIHFNMHDLVRDGALSIAQKEQNVFTLRNGKLDNWPELERCTSISICNSDIIDELPEEINCPQLKFFQIDSDDSSLKIPDSFFKGMKKLKVLMLTGIQLSSLPSSIESLSDLRLLCLERCTLDHNLSIIGKLKKLRILSFSGSRIENLPIGLKDLDKLQLLDISNCSIVTMIPPNLVSRLTLLEELYVRNCFMEVSEEGERNQSQISFISELKHLHQLQVVDLTIPCAEVFPKELFFDNLSDYKIEIGNFKTLSAGDFRMPNKYEKFKSLALELKDDTDNIHSQKGIKLLFKRVENLLLGELNGVQDAINELNLDGFPHLKHLSIVNNPSIKYIINSKDLFYPQDVFPKLESLCLYELRKIEMIYFSSGTEMIRSSPFTDCSFTKLKTIKVEKCEQLKNLFSFCMVKLLASLETIGVSNCGSLEEIIKIPDNSDKIDFLKLKSLSLESLSSFTSFYTTIEGSSTNRDQMQTTVMAHPLFGELVEIPNLENLNLISMNKIQKIWSDQPPSNFCFQNLIKLVVKDCHNLIYLCSLSMASSLRKLKGLFVSNCKMEKIFSTEGNSADKVCVFPKLEEIQLDQMDKLTDIWQAEVSVDSFSSLTSVYIYSCNKLDKIFPSHMEGWFASLNSLKVHSCQSVKVIFEIKDSQQVDASGGIDTNLQVVDVRGLPKLEQVWSRDPGGILNFKKLQSIQVSSCERLRNVFPASVAKDVPKLEYMSVGSCDGIVEIVACEDGSETNTEQLVFPELTYMDLGYLSSIQHFYRRRHTIECPKLKKLVVKECNKKLKTFQTGESNNEEDEAVFSAEKIFPNLECLHIDFDEAQKWLLGNTVKHRTHRLKELWLRNVNDGERLCQILYRMPNLEKLYLWDAEHLLKESSESRLGTVLQLKELVLWESEIKDIGFEREPVLQRLELLSLFGCDKLRNLAPPSVSLAYLTNLKVEYCGRLRNLMASSTAKSLVQLKSMKIRQCDELEEIVSNEGNEEEEQIVFGKLITVELEGLRKLKSFCRYKNCEFKFPSLKVLTVKECRMMETFTEGGARAPKLQNIVTDDNEEGKEEAKWQWEGDLNAVLESASTVSSLSLRDSPPLQVIWRGSRPITKWCFSKLKYLTVDGCQFLTDVVIPFYLLPFLTHLQQLQVSHCGSVKSIFDITQEREITTMGLGAAAFPRPLPFSLKKLTLERLPKLENVWNEDPHGILTMQLLQHVIVAEDNADPRGANLELTFPCPCVRSLKLQDLPKFKYFYYCSMQCDIFQTPTEDEKPTSNLQCLLLGEKGLEMIKRGEFQTNFLHKLQVLTLCFHIGSNVFPYEILQLAPNIEKLVVCDGSFKEIFCFDSLNVDEAGLLLQLKVLCLESLPELVSIGLENSWIQPLLGNLETLEVIRCSSLKDLVPSTVSFSNLTYLEVERCNSMLYLFTSSTARSLGQLKRMEIKMCDSIEEIVVSKEGDESHEDEIIFPQLNCLKLEELRKLRSFYKGSLLSFPSLEELSVISCEWMETLCPGTLKADKLVQVQLNRYSDAIKLENDLNSTMREAFGKKLWQSAHYKRYIDLKDSSLQEIWLRLHSLHIPPHFCFRYLYTLTVDGCHFLSDAVLPFSLLPLLPKLETLKVRNCDFVKIIFDVTTMAALPFALKNLILERLPNLENVWNSNVELTFPQVKSLALCDLPKLKYDMLKPFTHLQPHALNQLCIHKLTPNIEHLTLGEHELNMILRGEFQGNHLNELKVLALFFHIESDVFLQRVPNIEKLEVCDGYFKEIFCFDSLNVDEDGLVSQLKVICWDSLPELVSIGSENSGIVPFLRNLETLQVISCFSSINLVPCKVSFSNLTYLEVNRCKSLLYLFTSSTARSLGQLKTMKIKMCYSIEEIVSKEGDESHENETIFQQLNCLKLEYLFKLRRFYKGSLSFPSLEEFTVTYCERMESFCTGTVKTDKLLQVNINHRVIPLETDLNSAMQNR* 2434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0556 2433 Gene3D Ribonuclease Inhibitor 1700 1897 IPR032675 -
Gso7g0556 2433 Gene3D Ribonuclease Inhibitor 2158 2419 IPR032675 -
Gso7g0556 2433 Gene3D Ribonuclease Inhibitor 925 1136 IPR032675 -
Gso7g0556 2433 SUPERFAMILY RNI-like 1414 1718 - -
Gso7g0556 2433 SUPERFAMILY L domain-like 2033 2416 - -
Gso7g0556 2433 SUPERFAMILY L domain-like 965 1243 - -
Gso7g0556 2433 Pfam NB-ARC domain 312 400 IPR002182 GO:0043531
Gso7g0556 2433 Pfam NB-ARC domain 162 280 IPR002182 GO:0043531
Gso7g0556 2433 PRINTS Disease resistance protein signature 179 194 - -
Gso7g0556 2433 PRINTS Disease resistance protein signature 253 267 - -
Gso7g0556 2433 PRINTS Disease resistance protein signature 372 386 - -
Gso7g0556 2433 PRINTS Disease resistance protein signature 638 654 - -
Gso7g0556 2433 SUPERFAMILY L domain-like 491 934 - -
Gso7g0556 2433 Gene3D Ribonuclease Inhibitor 1898 2157 IPR032675 -
Gso7g0556 2433 PANTHER RPP4C3 25 1044 - -
Gso7g0556 2433 PANTHER RPP4C3 2281 2425 - -
Gso7g0556 2433 PANTHER RPP4C3 1053 1133 - -
Gso7g0556 2433 PANTHER RPP4C3 1390 1552 - -
Gso7g0556 2433 PANTHER RPP4C3 1168 1289 - -
Gso7g0556 2433 PANTHER RPP4C3 1867 2005 - -
Gso7g0556 2433 Gene3D Ribonuclease Inhibitor 1141 1414 IPR032675 -
Gso7g0556 2433 Gene3D Ribonuclease Inhibitor 470 745 IPR032675 -
Gso7g0556 2433 Gene3D - 340 421 IPR042197 -
Gso7g0556 2433 PANTHER - 1390 1552 - -
Gso7g0556 2433 PANTHER - 25 1044 - -
Gso7g0556 2433 PANTHER - 2281 2425 - -
Gso7g0556 2433 PANTHER - 1168 1289 - -
Gso7g0556 2433 PANTHER - 1867 2005 - -
Gso7g0556 2433 PANTHER - 1053 1133 - -
Gso7g0556 2433 SUPERFAMILY L domain-like 1558 1985 - -
Gso7g0556 2433 Coils Coil 41 89 - -
Gso7g0556 2433 Gene3D Ribonuclease Inhibitor 1430 1690 IPR032675 -
Gso7g0556 2433 SMART AAA_5 176 346 IPR003593 -
Gso7g0556 2433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 432 IPR027417 -
Gso7g0556 2433 SUPERFAMILY RNI-like 1142 1458 - -
Gso7g0556 2433 Gene3D - 145 338 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0556 Gso-Chr7 5663800 5679914 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0556 165 474 WRKY Transcription Factor Family AT5G45050 28.659 7.95e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0556 - - gsj:114418379 4164.76