Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0535 ATGGGAAACAGTGAGGATGAGAAATCTGTTAAGACTGGAAGCCCTTCTTCTTCACCTGCAACAACTGATCAGACCAACCAACCTAATATTCATGTCTATCCTGATTGGGCTGCCATGCAGTATTATGGGCCAAGAGTCAACATTCCACCATACTTCAACTCAGCTGTGGCTTCAGGTCATGCTCCACACCCATACATGTGGGGACCACCACAGCCTATGATGCCACCTTATGGGCCACCTTATGCAGCATTTTATTCGCATGGAGGGGTTTATACTCACCCTGCAGTTGCTATTGGGCCACACTTACATGGTCAAGGAGTTTCATCTTCACCTGCTGTTGGGACTCATTCAAGCATAGAATCACCAACCAAATTATCTGGAAATACTGATCAGGGTTTAATGAAGAAATCAAAAGGGTTTGATGGGCTTGCAATGTCAATAGGCAATTGCAATGCTGAGAGTGCTGAGCATGGAGCTGAGAACAGGCAGTCACAGAGTGTGGATACTGAGGGTTACAGCGACGGAAGTGATGGCAACACTGCAGGGGCTAATCAAACAAAAAGGAAAAGATGCCGAGAGGGAACACTGACCACTGATGGAGAAGGGAAAACTGAGCTACAAAATGGTCCGGCTTCCAAAGAGACTTCATCTTCCAAAAAGATTGTGTCAGCTACTCCAGCTAGTGTTGCCGGAACATTAGTTGGACCTGTAGTTTCTTCAGTTATGGCCACAACACTGGAACTGAGGAACCCTTCGACTGTTGATTCTAAGGCAAATTCCACAAGTGCCCCACAACCTTGTGCAATTGTGCCTAATGAAACTTGCTTACAGAATGAGCGTGAGCTGAAACGGGAGAGGAGAAAACAATCTAACCGTGAATCTGCTAGAAGGTCCAGGCTGAGGAAGCAGGCCGAGACTGAAGAATTGGCACGAAAAGTTGATATGTTAACTGCTGAGAATGTGTCCCTGAAGTCAGAAATAATTCAACTGACTGAAGGTTCTGAGCAGATGAGGATGGAAAATTCTGCATTGAGGGAAAAACTGAGAAATACTCAACTGGGACAAAGGGAAGAGATAATTTTGAGTAGCATCGAGAGTAAGAGGGCTGCACCTGTAAGTACAGAAAACTTGTTATCAAGAGTTAATAATTCTAGTTCTAATGACAGAACTACAGAGAATGAGAATGATTTCTGTGAGAACAAACCAAATTCTGGTGCAAAGCTGCATCAACTATTGGATACAAATCCTAGAGCAGATGCTGTGGCAGCTGGTTGA 1275 0.4463 MGNSEDEKSVKTGSPSSSPATTDQTNQPNIHVYPDWAAMQYYGPRVNIPPYFNSAVASGHAPHPYMWGPPQPMMPPYGPPYAAFYSHGGVYTHPAVAIGPHLHGQGVSSSPAVGTHSSIESPTKLSGNTDQGLMKKSKGFDGLAMSIGNCNAESAEHGAENRQSQSVDTEGYSDGSDGNTAGANQTKRKRCREGTLTTDGEGKTELQNGPASKETSSSKKIVSATPASVAGTLVGPVVSSVMATTLELRNPSTVDSKANSTSAPQPCAIVPNETCLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVDMLTAENVSLKSEIIQLTEGSEQMRMENSALREKLRNTQLGQREEIILSSIESKRAAPVSTENLLSRVNNSSSNDRTTENENDFCENKPNSGAKLHQLLDTNPRADAVAAG* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0535 424 Pfam Disordered region downstream of MFMR 130 258 - -
Gso7g0535 424 Pfam bZIP transcription factor 279 341 IPR004827 GO:0003700|GO:0006355
Gso7g0535 424 SMART brlzneu 279 343 IPR004827 GO:0003700|GO:0006355
Gso7g0535 424 PANTHER G-BOX-BINDING FACTOR 3 1 424 - -
Gso7g0535 424 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 286 301 IPR004827 GO:0003700|GO:0006355
Gso7g0535 424 SUPERFAMILY Leucine zipper domain 282 337 IPR046347 GO:0003700|GO:0006355
Gso7g0535 424 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 424 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gso7g0535 424 MobiDBLite consensus disorder prediction 156 185 - -
Gso7g0535 424 MobiDBLite consensus disorder prediction 378 424 - -
Gso7g0535 424 CDD bZIP_plant_GBF1 284 332 IPR045314 GO:0003700|GO:0006355
Gso7g0535 424 Coils Coil 306 326 - -
Gso7g0535 424 MobiDBLite consensus disorder prediction 281 308 - -
Gso7g0535 424 MobiDBLite consensus disorder prediction 200 224 - -
Gso7g0535 424 MobiDBLite consensus disorder prediction 154 224 - -
Gso7g0535 424 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 281 344 IPR004827 GO:0003700|GO:0006355
Gso7g0535 424 MobiDBLite consensus disorder prediction 107 136 - -
Gso7g0535 424 Gene3D - 282 335 - -
Gso7g0535 424 MobiDBLite consensus disorder prediction 252 271 - -
Gso7g0535 424 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Gso7g0535 424 MobiDBLite consensus disorder prediction 108 133 - -
Gso7g0535 424 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0535 Gso-Chr7 5410360 5415392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0535 1 424 bZIP Transcription Factor Family AT2G46270 48.492 7.05e-110 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso7g0535 MFMR_assoc 5.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0535 K09060 - gmx:100820423 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0535 7 5410360 5415392 Gso7g0535 7 5410360 5415392 ECH
Gso7g0535 7 5410360 5415392 Gso16g0238 16 2753352 2758411 GST