Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0516 ATGAGAGATAGCAAGCAGCACAGCAGAATGTGCAGCAGCAGCACCACCCTCGCATTCTTCCTTCTCATTGCACCACTCCTTTCCACTTCCACACCCACCATCAGCAGCAACAACAGAAGAATCCTCCACCAACCCCTTCTCCCCCAAAATGGATCCCCTCCTCCCTCACAACCCCCAAGCCCTCCTCCATCATCACCTCCAAACCCAAAGTACCCATTTTCAACCACACCCAATACCAATGCTTCTTCTTCCACACCCTTTTTCCCAACATACCCTTCTCCTCCTCCTCCTCCTTCTCCTTCTGCCTTTGCTTCCTTCCCTGCTAACATCTCCTCTCTCATCCTCCCCCAAACCCAAAAGTTCAAATCTTCCTCCAAAAAACTCCTCGCCGTCGCCATCGCCGCCGTCGCCTGCGCCGCCGCGGTCGTCGCCCTTTCCGCCTTCGTCTACTGCCGCCGCCGCCGCAAAAACTACTCCGCCGACGATAAAACCCTCAGATCCGACAGCAGCATCCGTCTCTTCCCTCGCGAAGCCTCCACCACATCCGGCGCCGCTTCCCGGAAAGCCAGAAACACGTCTTCTACAAGCTCTGAGTTTCTCTACCTTGGCACCATTGTGAACTCCCGCGGCGGCGTTGATGAGCTCTCTGACCCACGCGCCGCCGCGTTGAATCCTCGGAAAATGGACTCGCCAGAGCTCCAGCCGCTGCCGCCGCTGGCGCGGCAGGCTTCGAGGCTTCGGGAGGAATCGACGGCGACGGTGGAGGACGATGAAGAAGAGTTCTACTCGCCGAGAGGGTCGCTGAATAATGGAAGAGAAGGCTCCGCCGGAGCTGGATCGGGTTCCCGGCGAGTTTTCAACGCCATTGCCGGGGAAAACTTGGTTGGTCGTAGCAGCAGTGAGTCATCCACTTCTTCTTACTCTTCTTCCTCTTCTGCTTCCCCGGATCGCTCTCATTCCATTAGTCTTTCTCCTCCGGTGAGCATAAGCCCCAGAAAATCACTACCTAAGTCGCCGGAAAATACCATAACCCACCATTCGCCACCGCAGGAGGCGACGGCGATTAGAAGCTCGGCGTCCTCGTCCATACTGTCGTCTCCGTCGCCGGTTTTTGGGCAGCACGTGCCGTCGTCGTCAATATCGTCGACGCCGGAGCGGAGGGAGTGTCAGTCGCCGTCGCTGTCGCCGCTCTCTCTGTCTCCAAAGAAAAAACAAACCCCAGATGGAGAATCTGTTCCGGGACTTGTTGTGCTTGAAAAGACGCAATCTTTTGGTTCATCTAAGTCGAAAAACGAAAGTGGGTCACCGAGATTGTCCAACGCTTCTTCCAATGGGAAGTCCTCGGCGTTTTCTCTGCCGTCGCCGGTTATAGGGATGAACTTGCATCATGAGTTGGATCAGTCTCCGACAATATCCGACGTTTCAGATCGGTATCGACATTCTCCCCTTTCATCGTTGCATTTGTCACCGACGCTCCTTTCTTCGCCGGAGAGAGAGTTGAACTCTCAGCCTCAGCCACCACCTTCTCGGAAACACTGGGAGATTCCTGACTTGTTGACACCAATTGGCGAAGCACCAAATTTTTCAGTTCCACAGAGGAAACAATGGGAAATTCCGGTTCTTTCAGTACCAATTGCTCCATCTAGTAGTGTTTTAGCTCCGCCTCCACCTCCACCACCGCCACCGCCACCTCTGGCGGTTCCCCGGCAGCGTAAGCAGTGGGAGGTGCCGTCTCCAGTGACGCCGGTGGATCAACAGATTTCGAGGCCGGCGCCGCCGCTGACGCCACCTTCTAGGCCTTTTGTGTTGCAAACACCAAATACGAAGGTTTCCCCAGTTGAGTTGCCACCGGCTAGTTCTCAGAATTTTGAGGAGGGTTCTGAGGAGACATCTAAGCCTAAGTTGAAGCCTTTGCATTGGGACAAAGTGAGGGCCAGCTCTGATCGTGAGATGGTGTGGGATCAGTTGAGGTCCAGTTCTTTCAAGTTGAATGAGGAGATGATCGAAACTTTGTTTGTAGTGAACACGCCAAACCCAAAACCCAAGGATACTACTCCACGCTCAGTTCTTGCGCCACAAAATCAGGAGGATAGGGTATTGGATCCTAAAAAGTCCCAAAACATCGCTATCTTATTAAGGGCACTTAATGTGACTATTGAAGAAGTGTGTGAAGCACTCTTAGAAGGCATTACTGATACACTTGGAACCGAACTACTCGAAAGCTTGTTAAAAATGGCACCAAGCAAGGAGGAAGAACGCAAATTGAAGGAACATAAAGATGATTCTCCAACCAAACTTGGTCCTGCTGAGAAATTTTTGAAGGCAGTGCTTGATGTACCTTTCGCATTTAAAAGGGTGGAAGCAATGCTTTACATAGCCAATTTTGAGTCCGAAGTGGAGTATCTTAGGAAATCCTTTCAAACTTTGGAGGCTGCCTGTGAAGAGCTGCGAAACAGTAGAATGTTCTTGAAGCTTCTAGAGGCTGTGCTCAAAACTGGGAACCGTATGAATGTGGGGACCAACCGCGGCGATGCACACGCATTCAAGCTTGATACGCTTCTCAAGCTGGTTGACGTCAAAGGTGCGGACGGCAAAACCACTCTACTGCACTTCGTCGTACAAGAAATCATCAGAACTGAAGGCGCACGTCCCTCAAGTACTAATCAAACACCGAGCACGAACTTGAACGACGATGCCAAGTGTAGACGCCTCGGCCTGCAAGTCGTGTCTAGTCTGAGTTCTGACCTAGCGAGTGTGAAGAAGGCCGCTGCTATGGACTCTGAAGTCCTCAGCAGCGAGGTATCCAAACTCTCCAAAGGGATTGCACACATTGCAGAGGCTGTGCAGTTGGATGAAGCAGCAGGGTCAGATGAAAGCAGCCAGAAGTTCAGAGAGTCGATGAACAAGTTCATGAGAATGGCTGAGGAGGAGATTCTAAAAGTCCAAGCACAAGAAAGTGTTGCCTTATCCCTTGTGAAGGAGATCACAGAGTATTTCCATGGGAACTTGTCAAAGGAAGAAGCTCATCCATTTAGAATCTTCATGGTAGTAAGAGACTTCTTAACAGTTCTTGATAGGGTGTGCAAAGAAGTTGGAATGATAAATGAGAGAACCATGGTTAGTTCAGCACATAGATTCCCTGTCCCAGTGAACCCTATGCTTCCACAACCCCTTCCAGGACTTGTTGGAAAGAGACAATACAATTCCTCAGATGATGATGATCATAGTCCATCTCCTTAG 3240 0.513 MRDSKQHSRMCSSSTTLAFFLLIAPLLSTSTPTISSNNRRILHQPLLPQNGSPPPSQPPSPPPSSPPNPKYPFSTTPNTNASSSTPFFPTYPSPPPPPSPSAFASFPANISSLILPQTQKFKSSSKKLLAVAIAAVACAAAVVALSAFVYCRRRRKNYSADDKTLRSDSSIRLFPREASTTSGAASRKARNTSSTSSEFLYLGTIVNSRGGVDELSDPRAAALNPRKMDSPELQPLPPLARQASRLREESTATVEDDEEEFYSPRGSLNNGREGSAGAGSGSRRVFNAIAGENLVGRSSSESSTSSYSSSSSASPDRSHSISLSPPVSISPRKSLPKSPENTITHHSPPQEATAIRSSASSSILSSPSPVFGQHVPSSSISSTPERRECQSPSLSPLSLSPKKKQTPDGESVPGLVVLEKTQSFGSSKSKNESGSPRLSNASSNGKSSAFSLPSPVIGMNLHHELDQSPTISDVSDRYRHSPLSSLHLSPTLLSSPERELNSQPQPPPSRKHWEIPDLLTPIGEAPNFSVPQRKQWEIPVLSVPIAPSSSVLAPPPPPPPPPPPLAVPRQRKQWEVPSPVTPVDQQISRPAPPLTPPSRPFVLQTPNTKVSPVELPPASSQNFEEGSEETSKPKLKPLHWDKVRASSDREMVWDQLRSSSFKLNEEMIETLFVVNTPNPKPKDTTPRSVLAPQNQEDRVLDPKKSQNIAILLRALNVTIEEVCEALLEGITDTLGTELLESLLKMAPSKEEERKLKEHKDDSPTKLGPAEKFLKAVLDVPFAFKRVEAMLYIANFESEVEYLRKSFQTLEAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARPSSTNQTPSTNLNDDAKCRRLGLQVVSSLSSDLASVKKAAAMDSEVLSSEVSKLSKGIAHIAEAVQLDEAAGSDESSQKFRESMNKFMRMAEEEILKVQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLTVLDRVCKEVGMINERTMVSSAHRFPVPVNPMLPQPLPGLVGKRQYNSSDDDDHSPSP* 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0516 1079 Pfam Formin Homology 2 Domain 627 1024 IPR015425 -
Gso7g0516 1079 PANTHER FORMIN-LIKE PROTEIN 1 18 1077 - -
Gso7g0516 1079 MobiDBLite consensus disorder prediction 44 102 - -
Gso7g0516 1079 MobiDBLite consensus disorder prediction 296 405 - -
Gso7g0516 1079 MobiDBLite consensus disorder prediction 465 508 - -
Gso7g0516 1079 MobiDBLite consensus disorder prediction 248 263 - -
Gso7g0516 1079 MobiDBLite consensus disorder prediction 549 568 - -
Gso7g0516 1079 Gene3D Formin, FH2 domain 620 1033 IPR042201 -
Gso7g0516 1079 MobiDBLite consensus disorder prediction 88 102 - -
Gso7g0516 1079 MobiDBLite consensus disorder prediction 225 282 - -
Gso7g0516 1079 SMART it6_source 625 1039 IPR015425 -
Gso7g0516 1079 MobiDBLite consensus disorder prediction 1057 1079 - -
Gso7g0516 1079 MobiDBLite consensus disorder prediction 547 633 - -
Gso7g0516 1079 PANTHER FORMIN-RELATED 18 1077 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso7g0516 1079 MobiDBLite consensus disorder prediction 296 517 - -
Gso7g0516 1079 SUPERFAMILY Formin homology 2 domain (FH2 domain) 554 1036 - -
Gso7g0516 1079 MobiDBLite consensus disorder prediction 420 454 - -
Gso7g0516 1079 MobiDBLite consensus disorder prediction 601 626 - -
Gso7g0516 1079 MobiDBLite consensus disorder prediction 48 73 - -
Gso7g0516 1079 ProSiteProfiles Formin homology-2 (FH2) domain profile. 625 1050 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0516 Gso-Chr7 5252219 5257177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0516 574 1076 FH2 protein (formin) Gene Family AT3G25500 74.806 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0516 - - gmx:100800333 1702.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0516 7 5252219 5257177 Gso16g0225 16 2646562 2651486 GST